RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 NR2F6P10588 404 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 CPA1P15085 419 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 ZFXP17010 805 aaPredicted RBP3.57□□□□□ -1.84
VCL-203ENST00000461383 NDUFB7P17568 137 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 ADRA1DP25100 572 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 GKP32189 559 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 THBS4P35443 961 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TXNL4AP83876 142 aaKnown RBP3.57□□□□□ -1.84
VCL-203ENST00000461383 BMPR2Q13873 1038 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TBRG1Q3YBR2 411 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TRIM60Q495X7 471 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 GALNTL6Q49A17 601 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 CTXN3Q4LDR2 81 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TBC1D3GQ6DHY5 549 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 DGAT2L7PQ6IED9 249 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TBC1D3CQ6IPX1 549 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 VWA1Q6PCB0 445 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 PIK3AP1Q6ZUJ8 805 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 MAVSQ7Z434 540 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.57□□□□□ -1.84
VCL-203ENST00000461383 TMTC1Q8IUR5 882 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 CPOQ8IVL8 374 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TBC1D3Q8IZP1 549 aaPredicted RBP3.57□□□□□ -1.84
VCL-203ENST00000461383 LCORLQ8N3X6 602 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 LNX2Q8N448 690 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TCP11L2Q8N4U5 519 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 FSIP1Q8NA03 581 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 SIMC1Q8NDZ2 872 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 PROKR1Q8TCW9 393 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 ASB10Q8WXI3 467 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 OVCA2Q8WZ82 227 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 HERVK_113Q902F9 699 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 HAS1Q92839 578 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 DVL3Q92997 716 aaPredicted RBP3.57□□□□□ -1.84
VCL-203ENST00000461383 HVCN1Q96D96 273 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 RSPRY1Q96DX4 576 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 AIFM2Q9BRQ8 373 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 CINPQ9BW66 212 aaPredicted RBP3.57□□□□□ -1.84
VCL-203ENST00000461383 UBN1Q9NPG3 1134 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 G6PC2Q9NQR9 355 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 SNX15Q9NRS6 342 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TMLHEQ9NVH6 421 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 KCTD5Q9NXV2 234 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TERF2IPQ9NYB0 399 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 CEP72Q9P209 647 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 MGAT4CQ9UBM8 478 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 ARHGAP26Q9UNA1 814 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 FZD1Q9UP38 647 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 SH2B3Q9UQQ2 575 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 UBE2J1Q9Y385 318 aaPredicted RBP3.57□□□□□ -1.84
VCL-203ENST00000461383 TESMINQ9Y4I5 508 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 PCDHB2Q9Y5E7 798 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 ADGRA2Q96PE1 1338 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 STX16-NPEPL1H3BU86 382 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 STX16O14662 325 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 CA12O43570 354 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 TMPRSS11DO60235 418 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 TSPAN3O60637 253 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 RHOBTB3O94955 611 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 IFIT1P09914 478 aaKnown RBP3.56□□□□□ -1.84
VCL-203ENST00000461383 ALADP13716 330 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 ZNF20P17024 532 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 NR4A1P22736 598 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 GRK5P34947 590 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 CASP2P42575 452 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 PCP4P48539 62 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 VAMP2P63027 116 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 SLC25A3Q00325 362 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 E2F1Q01094 437 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 FHL3Q13643 280 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 SMAD1Q15797 465 aaKnown RBP3.56□□□□□ -1.84
VCL-203ENST00000461383 SPDYAQ5MJ70 313 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 LY6G5CQ5SRR4 150 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 ABHD17BQ5VST6 288 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 KAZNQ674X7 775 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 ATG16L1Q676U5 607 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 PARS2Q7L3T8 475 aaKnown RBP3.56□□□□□ -1.84
VCL-203ENST00000461383 ARHGEF19Q8IW93 802 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 ANKRD44Q8N8A2 993 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 FAM71DQ8N9W8 422 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 TFAP2BQ92481 460 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 HTRA1Q92743 480 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 STAMQ92783 540 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 MCRS1Q96EZ8 462 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 RBM17Q96I25 401 aaKnown RBP3.56□□□□□ -1.84
VCL-203ENST00000461383 PBKQ96KB5 322 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 Q96MF0 132 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 PRR25Q96S07 402 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 SENP7Q9BQF6 1050 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 MECRQ9BV79 373 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 TWSG1Q9GZX9 223 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 ZNF703Q9H7S9 590 aaPredicted RBP3.56□□□□□ -1.84
VCL-203ENST00000461383 USP29Q9HBJ7 922 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 ARHGEF3Q9NR81 526 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 RASSF1Q9NS23 344 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 MAP3K20Q9NYL2 800 aaKnown RBP3.56□□□□□ -1.84
VCL-203ENST00000461383 DKK3Q9UBP4 350 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 FBXO9Q9UK97 447 aaPredicted RBP3.56□□□□□ -1.84
VCL-203ENST00000461383 RAB21Q9UL25 225 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 TRPC5Q9UL62 973 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms