RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 TNFAIP8O95379 198 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 ITGB3P05106 788 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 ANXA6P08133 673 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 SLC2A4P14672 509 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 FXR1P51114 621 aaKnown RBP eCLIP9.24□□□□□ -0.93
BRCA1-205ENST00000461221 RHOAP61586 193 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 SLFN11Q7Z7L1 901 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 SIRT2Q8IXJ6 389 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 CARNMT1Q8N4J0 409 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 CENPIQ92674 756 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-205ENST00000461221 FICDQ9BVA6 458 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 NFKBIZQ9BYH8 718 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 ZFYVE16Q7Z3T8 1539 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 MGRN1O60291 552 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 HIRAP54198 1017 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-205ENST00000461221 SKP1P63208 163 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 ATP1A4Q13733 1029 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 TAF13Q15543 124 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 CCDC153Q494R4 210 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 AGKQ53H12 422 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 ZNF605Q86T29 641 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 CAMKK1Q8N5S9 505 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 FBXO32Q969P5 355 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 MAGEB10Q96LZ2 347 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-205ENST00000461221 IRX2Q9BZI1 471 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-205ENST00000461221 CYP4F12Q9HCS2 524 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 ITGB1BP2Q9UKP3 347 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 SNX8Q9Y5X2 465 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 NCAM2O15394 837 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 ATP9AO75110 1047 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 BAIAP3O94812 1187 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 LDLRP01130 860 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 RHOCP08134 193 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 UQCRBP14927 111 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 ALOX12P18054 663 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 LBPP18428 481 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 MSH3P20585 1137 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 AMPD2Q01433 879 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 MCL1Q07820 350 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 ZFP1Q6P2D0 407 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 DHFR2Q86XF0 187 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 CBWD2Q8IUF1 395 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 CASKIN2Q8WXE0 1202 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 FIG4Q92562 907 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 NACC2Q96BF6 587 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 TMEM237Q96Q45 408 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 PAFAH2Q99487 392 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 NOL6Q9H6R4 1146 aaKnown RBP9.23□□□□□ -0.93
BRCA1-205ENST00000461221 TMBIM4Q9HC24 238 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 COMMD9Q9P000 198 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 TRIM10Q9UDY6 481 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 CROTQ9UKG9 612 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 C1orf232A0A0U1RR37 186 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 C17orf102A2RUQ5 167 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 STAU1O95793 577 aaKnown RBP9.23□□□□□ -0.93
BRCA1-205ENST00000461221 RPLP2P05387 115 aaKnown RBP9.23□□□□□ -0.93
BRCA1-205ENST00000461221 RARGP13631 454 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 CCT3P49368 545 aaKnown RBP9.23□□□□□ -0.93
BRCA1-205ENST00000461221 CYP24A1Q07973 514 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 PRKAA1Q13131 559 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 EZH2Q15910 746 aaKnown RBP9.23□□□□□ -0.93
BRCA1-205ENST00000461221 SBK1Q52WX2 424 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 ULK2Q8IYT8 1036 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 TMEM132CQ8N3T6 1108 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 EPS8L3Q8TE67 593 aaKnown RBP9.23□□□□□ -0.93
BRCA1-205ENST00000461221 ZBTB10Q96DT7 871 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 ERGIC2Q96RQ1 377 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 OXCT2Q9BYC2 517 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-205ENST00000461221 GSTK1Q9Y2Q3 226 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 C15orf38-AP3S2A0A0A6YYH1 394 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 RAD51BO15315 384 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 ZC3H11AO75152 810 aaKnown RBP eCLIP9.23□□□□□ -0.93
BRCA1-205ENST00000461221 ENTPD3O75355 529 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 CCNA2P20248 432 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 TGFBR2P37173 567 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 FXR2P51116 673 aaKnown RBP eCLIP9.23□□□□□ -0.93
BRCA1-205ENST00000461221 PUDPQ08623 228 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 MPP3Q13368 585 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 TOP3AQ13472 1001 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-205ENST00000461221 FBXO42Q6P3S6 717 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 RAD9BQ6WBX8 426 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 ARPINQ7Z6K5 226 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 TC2NQ8N9U0 490 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 ZNF671Q8TAW3 534 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 MYCBPAPQ8TBZ2 947 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 TMEM169Q96HH4 297 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 ACOX2Q99424 681 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 C9orf16Q9BUW7 83 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 ZCCHC2Q9C0B9 1178 aaKnown RBP9.23□□□□□ -0.93
BRCA1-205ENST00000461221 ANKRD6Q9Y2G4 727 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 MROH7Q68CQ1 1323 aa9.23□□□□□ -0.93
BRCA1-205ENST00000461221 F8VZ95 297 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 GPR182O15218 404 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 CYP27B1O15528 508 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 RPN2P04844 631 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 FGRP09769 529 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 RPA1P27694 616 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 GLRBP48167 497 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 C21orf59P57076 290 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 FAXCQ5TGI0 409 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms