RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 RPS12P25398 132 aaKnown RBP12.52□□□□□ -0.41
GCOM1-203ENST00000460962 RGS7P49802 495 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 NDST1P52848 882 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 ACTR3P61158 418 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 WASHC5Q12768 1159 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 CCDC14Q49A88 953 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 CDKL3Q8IVW4 592 aaPredicted RBP12.52□□□□□ -0.41
GCOM1-203ENST00000460962 FAM172AQ8WUF8 416 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 HPDLQ96IR7 371 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 TTC1Q99614 292 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 EBF4Q9BQW3 602 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 SNRNP25Q9BV90 132 aaKnown RBP12.52□□□□□ -0.41
GCOM1-203ENST00000460962 CCDC106Q9BWC9 280 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 XAB2Q9HCS7 855 aaKnown RBP12.52□□□□□ -0.41
GCOM1-203ENST00000460962 THAP1Q9NVV9 213 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 SSC5DA1L4H1 1573 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 GPR25O00155 361 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 BAG2O95816 211 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 TOP3BO95985 862 aaKnown RBP12.52□□□□□ -0.41
GCOM1-203ENST00000460962 STAG3L1P0CL83 205 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 DESP17661 470 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 SDC4P31431 198 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 ATICP31939 592 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 PAPOLAP51003 745 aaKnown RBP12.52□□□□□ -0.41
GCOM1-203ENST00000460962 UBAP2LQ14157 1087 aaKnown RBP12.52□□□□□ -0.41
GCOM1-203ENST00000460962 MAP1SQ66K74 1059 aaPredicted RBP12.52□□□□□ -0.41
GCOM1-203ENST00000460962 SLC9A4Q6AI14 798 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 ARCQ7LC44 396 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 WDR75Q8IWA0 830 aaKnown RBP12.52□□□□□ -0.41
GCOM1-203ENST00000460962 MPP5Q8N3R9 675 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 SIGLEC10Q96LC7 697 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 MINDY3Q9H8M7 445 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 BARX2Q9UMQ3 279 aaPredicted RBP12.52□□□□□ -0.41
GCOM1-203ENST00000460962 C2CD2Q9Y426 696 aa12.52□□□□□ -0.41
GCOM1-203ENST00000460962 HMX2A2RU54 273 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 SOWAHBA6NEL2 793 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 METTL18O95568 372 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 GMPSP49915 693 aaPredicted RBP12.51□□□□□ -0.41
GCOM1-203ENST00000460962 CLCN3P51790 818 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 GSTA3Q16772 222 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 CA9Q16790 459 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 HSDL1Q3SXM5 330 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 IZUMO2Q6UXV1 221 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 C4orf22Q6V702 233 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 GATA6Q92908 595 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 CYP3A5P20815 502 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 EDNRBP24530 442 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 DSG1Q02413 1049 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 MBTD1Q05BQ5 628 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 LCLAT1Q6UWP7 414 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 MYLK4Q86YV6 388 aaPredicted RBP12.51□□□□□ -0.41
GCOM1-203ENST00000460962 TBCBQ99426 244 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 ZNF670Q9BS34 389 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 APOL6Q9BWW8 343 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 PDGFDQ9GZP0 370 aaPredicted RBP12.51□□□□□ -0.41
GCOM1-203ENST00000460962 SOX13Q9UN79 622 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 PCDHA11Q9Y5I1 949 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.51□□□□□ -0.41
GCOM1-203ENST00000460962 MEI4A8MW99 385 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 MAGEA3P43357 314 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 FASTKD1Q53R41 847 aaKnown RBP12.51□□□□□ -0.41
GCOM1-203ENST00000460962 KYAT3Q6YP21 454 aaKnown RBP12.51□□□□□ -0.41
GCOM1-203ENST00000460962 ZNF534Q76KX8 674 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 NCAPG2Q86XI2 1143 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 ADGRF2Q8IZF7 708 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 SLC25A41Q8N5S1 370 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 GPR20Q99678 358 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 C1orf21Q9H246 121 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 VRTNQ9H8Y1 702 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 PIDD1Q9HB75 910 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 GBA2Q9HCG7 927 aaPredicted RBP12.51□□□□□ -0.41
GCOM1-203ENST00000460962 GJA3Q9Y6H8 435 aa12.51□□□□□ -0.41
GCOM1-203ENST00000460962 UBTFL6P0CB48 400 aaPredicted RBP12.5□□□□□ -0.41
GCOM1-203ENST00000460962 TPSB2P20231 275 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 CYP2F1P24903 491 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 HIC1Q14526 733 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 TPSAB1Q15661 275 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 GOLGA7BQ2TAP0 167 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 EFCAB12Q6NXP0 572 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 CASC4Q6P4E1 433 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 C12orf29Q8N999 325 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 NT5C1AQ9BXI3 368 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 NRDE2Q9H7Z3 1164 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 SORCS3Q9UPU3 1222 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 ARHGAP42A6NI28 874 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 SDR42E2A6NKP2 422 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 CSDE1O75534 798 aaKnown RBP12.5□□□□□ -0.41
GCOM1-203ENST00000460962 ARIH2O95376 493 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 CNTFP26441 200 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 NBPF20Q3BBV1 942 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 CCDC33Q8N5R6 958 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 PHC3Q8NDX5 983 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 CXorf38Q8TB03 319 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 PIWIL2Q8TC59 973 aaKnown RBP12.5□□□□□ -0.41
GCOM1-203ENST00000460962 IFT43Q96FT9 208 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 TRAPPC9Q96Q05 1148 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 NR1H4Q96RI1 486 aaPredicted RBP12.5□□□□□ -0.41
GCOM1-203ENST00000460962 SIKE1Q9BRV8 207 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 GPAMQ9HCL2 828 aa12.5□□□□□ -0.41
GCOM1-203ENST00000460962 PDP2Q9P2J9 529 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms