RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 LEMD2Q8NC56 503 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 RPLP0P6Q8NHW5 317 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 SETD7Q8WTS6 366 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 LEO1Q8WVC0 666 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 FGF11Q92914 225 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 EXOC4Q96A65 974 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 MTMR8Q96EF0 704 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 TCEAL4Q96EI5 215 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 TMEM176AQ96HP8 235 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 CNOT6LQ96LI5 555 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 ZSWIM3Q96MP5 696 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 CEP89Q96ST8 783 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 LGMNQ99538 433 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 ASPSCR1Q9BZE9 553 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 CDIP1Q9H305 208 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 TRIT1Q9H3H1 467 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 LRRC4CQ9HCJ2 640 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 UBN1Q9NPG3 1134 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 GPRC5CQ9NQ84 441 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 ZNF302Q9NR11 478 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 MAN2B2Q9Y2E5 1009 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 PCDHA9Q9Y5H5 950 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 MYOFQ9NZM1 2061 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 NCANO14594 1321 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 NF1P21359 2839 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 OBSL1O75147 1896 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 TRBV23OR9-2A0A075B6M9 112 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 TMEM82A0PJX8 343 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 ARHGEF37A1IGU5 675 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 KLRF2D3W0D1 207 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 MEIS1O00470 390 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 PRRG1O14668 218 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 TRDMT1O14717 391 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 AP5Z1O43299 807 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 ALDH1A2O94788 518 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 EGFP01133 1207 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 PCP11498 1178 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 KRT10P13645 584 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 PLS3P13797 630 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 DRD1P21728 446 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 ELF1P32519 619 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 KIF5BP33176 963 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 OR1D2P34982 312 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 ACTN2P35609 894 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 CCR2P41597 374 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 GUCY2FP51841 1108 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 NEK4P51957 841 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 EPHB1P54762 984 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 SLFN5Q08AF3 891 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 ELAVL2Q12926 359 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 BYSLQ13895 437 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 NFE2Q16621 373 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 FAM171A1Q5VUB5 890 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 MIS18BP1Q6P0N0 1132 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 CEP85Q6P2H3 762 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 USP17L6PQ6QN14 398 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 RNF111Q6ZNA4 994 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 MFSD6Q6ZSS7 791 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 CATSPER4Q7RTX7 472 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 TRMT1LQ7Z2T5 733 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 MRPL10Q7Z7H8 261 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 RASSF3Q86WH2 238 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 TMPRSS12Q86WS5 348 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 IQCA1Q86XH1 822 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 SPATS2Q86XZ4 545 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 TMC8Q8IU68 726 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 CCDC60Q8IWA6 550 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 LRRC71Q8N4P6 559 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 TMEM57Q8N5G2 664 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 LINC01465Q8N7H1 131 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 CNNM3Q8NE01 707 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 ATL2Q8NHH9 583 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 PCDH19Q8TAB3 1148 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 CCDC26Q8TAB7 109 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 LNX1Q8TBB1 728 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 ESR2Q92731 530 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 ZFYVE19Q96K21 471 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 IFT22Q9H7X7 185 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 PRDM16Q9HAZ2 1276 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 LY9Q9HBG7 655 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 CRTAC1Q9NQ79 661 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 KCNH7Q9NS40 1196 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 SEMA3GQ9NS98 782 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 GPATCH2Q9NW75 528 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 STOML1Q9UBI4 398 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 UBIAD1Q9Y5Z9 338 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 ZFHX3Q15911 3703 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 LRRK1Q38SD2 2015 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 ANKHD1Q8IWZ3 2542 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 DOCK9Q9BZ29 2069 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 CRYBG3Q68DQ2 2970 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 CCDC168Q8NDH2 2452 aa4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 ARID1BQ8NFD5 2236 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-211ENST00000460558 ESPL1Q14674 2120 aa4.43□□□□□ -1.7
ECHDC1-211ENST00000460558 HIVEP3Q5T1R4 2406 aa4.43□□□□□ -1.7
ECHDC1-211ENST00000460558 A0A1W2PQD8 194 aa4.43□□□□□ -1.7
ECHDC1-211ENST00000460558 ARL5CA6NH57 179 aa4.43□□□□□ -1.7
ECHDC1-211ENST00000460558 NEMP1O14524 444 aa4.43□□□□□ -1.7
ECHDC1-211ENST00000460558 FLRT2O43155 660 aa4.43□□□□□ -1.7
ECHDC1-211ENST00000460558 ADAM12O43184 909 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms