RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 CLOCKO15516 846 aa10.05□□□□□ -0.8
UFD1-205ENST00000459854 CYTH3O43739 400 aa10.05□□□□□ -0.8
UFD1-205ENST00000459854 COMTP21964 271 aa10.05□□□□□ -0.8
UFD1-205ENST00000459854 PTENP60484 403 aa10.05□□□□□ -0.8
UFD1-205ENST00000459854 JAG1P78504 1218 aa10.05□□□□□ -0.8
UFD1-205ENST00000459854 CDK16Q00536 496 aa10.05□□□□□ -0.8
UFD1-205ENST00000459854 MMRN1Q13201 1228 aa10.05□□□□□ -0.8
UFD1-205ENST00000459854 TSTA3Q13630 321 aaPredicted RBP10.05□□□□□ -0.8
UFD1-205ENST00000459854 PADI6Q6TGC4 694 aa10.05□□□□□ -0.8
UFD1-205ENST00000459854 GPR142Q7Z601 462 aa10.05□□□□□ -0.8
UFD1-205ENST00000459854 TCAIMQ8N3R3 496 aa10.05□□□□□ -0.8
UFD1-205ENST00000459854 RNF217Q8TC41 542 aa10.05□□□□□ -0.8
UFD1-205ENST00000459854 AGAP11Q8TF27 550 aa10.05□□□□□ -0.8
UFD1-205ENST00000459854 DIS3LQ8TF46 1054 aaKnown RBP10.05□□□□□ -0.8
UFD1-205ENST00000459854 PIGUQ9H490 435 aa10.05□□□□□ -0.8
UFD1-205ENST00000459854 GOLPH3Q9H4A6 298 aa10.05□□□□□ -0.8
UFD1-205ENST00000459854 STN1Q9H668 368 aaKnown RBP10.05□□□□□ -0.8
UFD1-205ENST00000459854 RMND5AQ9H871 391 aa10.05□□□□□ -0.8
UFD1-205ENST00000459854 PLEKHA5Q9HAU0 1116 aa10.05□□□□□ -0.8
UFD1-205ENST00000459854 C6orf203Q9P0P8 240 aaPredicted RBP10.05□□□□□ -0.8
UFD1-205ENST00000459854 TRIM49D1C9J1S8 452 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 INO80B-WBP1J3KQ70 363 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 KCNN4O15554 427 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 IFNA14P01570 189 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 FMO5P49326 533 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 CCT3P49368 545 aaKnown RBP10.04□□□□□ -0.8
UFD1-205ENST00000459854 NAB1Q13506 487 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 NTRK3Q16288 839 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 CDO1Q16878 200 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 FAM83EQ2M2I3 478 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 LINC00523Q86TU6 105 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 SLC26A11Q86WA9 606 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 MINDY2Q8NBR6 621 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 EPS8L3Q8TE67 593 aaKnown RBP10.04□□□□□ -0.8
UFD1-205ENST00000459854 OXNAD1Q96HP4 312 aaPredicted RBP10.04□□□□□ -0.8
UFD1-205ENST00000459854 EGFL8Q99944 293 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 INO80BQ9C086 356 aaPredicted RBP10.04□□□□□ -0.8
UFD1-205ENST00000459854 ARHGEF38Q9NXL2 777 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 IMPDH2P12268 514 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 KLRC1P26715 233 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 CPA2P48052 419 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 NCKAP1LP55160 1127 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 MAP2K5Q13163 448 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 ANO4Q32M45 955 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 LACTB2Q53H82 288 aaPredicted RBP10.04□□□□□ -0.8
UFD1-205ENST00000459854 C6orf10Q5SRN2 563 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 ZNF662Q6ZS27 426 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 ANKS3Q6ZW76 656 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 CAMK1DQ8IU85 385 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 THNSL1Q8IYQ7 743 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 AMER2Q8N7J2 671 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 GRPEL2Q8TAA5 225 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 FAM193BQ96PV7 902 aaPredicted RBP10.04□□□□□ -0.8
UFD1-205ENST00000459854 RAB6BQ9NRW1 208 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 COMMD8Q9NX08 183 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 TRIM10Q9UDY6 481 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 MYH1P12882 1939 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 LOC100653049A0A140TA62 436 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 RAD51BO15315 384 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 KRT34O76011 436 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 ZNF12P17014 697 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 MAPK1P28482 360 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 STAT5AP42229 794 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 STAT5BP51692 787 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 RPS6KA3P51812 740 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 TUBA1BP68363 451 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 C2CD6Q53TS8 623 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 AARS2Q5JTZ9 985 aaKnown RBP10.04□□□□□ -0.8
UFD1-205ENST00000459854 TTC23LQ6PF05 361 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 TUBA1AQ71U36 451 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 ZNF507Q8TCN5 953 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 TINF2Q9BSI4 451 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 CHID1Q9BWS9 393 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 TMEM260Q9NX78 707 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 CACNA2D2Q9NY47 1150 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 CCDC59Q9P031 241 aaKnown RBP10.04□□□□□ -0.8
UFD1-205ENST00000459854 EMSYQ7Z589 1322 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 LTBP1Q14766 1721 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 KIF28PB7ZC32 967 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 GUCY1B2O75343 617 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 P4HBP07237 508 aaKnown RBP10.04□□□□□ -0.8
UFD1-205ENST00000459854 FESP07332 822 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 ME2P23368 584 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 GPC3P51654 580 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 HK2P52789 917 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 PEX3P56589 373 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 PDPK2PQ6A1A2 396 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 C11orf63Q6NUN7 778 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 ABRAQ8N0Z2 381 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 DHRSXQ8N5I4 330 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 OR6Y1Q8NGX8 325 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 SYTL5Q8TDW5 730 aaPredicted RBP10.04□□□□□ -0.8
UFD1-205ENST00000459854 CAPSLQ8WWF8 208 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 FAM111AQ96PZ2 611 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 APBA2Q99767 749 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 MLPHQ9BV36 600 aaPredicted RBP10.04□□□□□ -0.8
UFD1-205ENST00000459854 SPRTNQ9H040 489 aaPredicted RBP10.04□□□□□ -0.8
UFD1-205ENST00000459854 PCDHB2Q9Y5E7 798 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 RAD54BQ9Y620 910 aa10.04□□□□□ -0.8
UFD1-205ENST00000459854 FAM170AA1A519 330 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms