RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 H0YCG3 227 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 SGK1O00141 431 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 ANP32DO95626 131 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 SUPT20HL2P0C7V6 817 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 RPA3P35244 121 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-207ENST00000458046 HADHAP40939 763 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 BACE1P56817 501 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 GAD2Q05329 585 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 SP140Q13342 867 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 RIPK1Q13546 671 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 TMEM132BQ14DG7 1078 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 SUPT20HL1Q3ZLR7 823 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 DNAJC24Q6P3W2 148 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 CCDC81Q6ZN84 652 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 SAMD7Q7Z3H4 446 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 ALLCQ8N6M5 410 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 SUN5Q8TC36 379 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 THAP3Q8WTV1 239 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-207ENST00000458046 RBM41Q96IZ5 413 aaKnown RBP12.24□□□□□ -0.45
SYNE2-207ENST00000458046 PORCNQ9H237 461 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 CYP39A1Q9NYL5 469 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 GRID1Q9ULK0 1009 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 PCDHGC3Q9UN70 934 aa12.24□□□□□ -0.45
SYNE2-207ENST00000458046 CNTNAP2Q9UHC6 1331 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 A0A0B4J269 797 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 CFAP99D6REC4 459 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 WEE2P0C1S8 567 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 TBXAS1P24557 533 aaPredicted RBP12.23□□□□□ -0.45
SYNE2-207ENST00000458046 PBLDP30039 288 aaPredicted RBP12.23□□□□□ -0.45
SYNE2-207ENST00000458046 LRRC74AQ0VAA2 488 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 PDIA2Q13087 525 aaKnown RBP12.23□□□□□ -0.45
SYNE2-207ENST00000458046 LAPTM5Q13571 262 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 WDR72Q3MJ13 1102 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 FAM182AQ5T1J6 154 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 HEATR6Q6AI08 1181 aaKnown RBP12.23□□□□□ -0.45
SYNE2-207ENST00000458046 SLFN12LQ6IEE8 588 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 CRTC1Q6UUV9 634 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 CGRRF1Q99675 332 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 TNKS2Q9H2K2 1166 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 TCF7L2Q9NQB0 619 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 ZNF302Q9NR11 478 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 ARHGEF3Q9NR81 526 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 UBAP1Q9NZ09 502 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 ZNF214Q9UL59 606 aaPredicted RBP12.23□□□□□ -0.45
SYNE2-207ENST00000458046 SPATA31C2B4DYI2 1134 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 B9A039 149 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 MASP2O00187 686 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 KCNA3P22001 575 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 GBP2P32456 591 aaPredicted RBP12.23□□□□□ -0.45
SYNE2-207ENST00000458046 MSH2P43246 934 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 MYL6P60660 151 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 ENPEPQ07075 957 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 SMTNL2Q2TAL5 461 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 KCNT1Q5JUK3 1230 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 PERM1Q5SV97 790 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 C1orf53Q5VUE5 145 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 CIAPIN1Q6FI81 312 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 SCARA5Q6ZMJ2 495 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 TMEM110Q86TL2 294 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 PPM1NQ8N819 430 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 SLC7A3Q8WY07 619 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 LRGUKQ96M69 825 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 ETNK1Q9HBU6 452 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 SLC5A4Q9NY91 659 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 PCDHB3Q9Y5E6 796 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 ACTL7BQ9Y614 415 aa12.23□□□□□ -0.45
SYNE2-207ENST00000458046 AREL1O15033 823 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 PEX10O60683 326 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 USP2O75604 605 aaPredicted RBP12.22□□□□□ -0.45
SYNE2-207ENST00000458046 ABHD2P08910 425 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 ATP6V1B1P15313 513 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 CA4P22748 312 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 CENPAP49450 140 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 AP1B1Q10567 949 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 SLC1A5Q15758 541 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 SLC14A2Q15849 920 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 MAJINQ3KP22 176 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 GNPTABQ3T906 1256 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 RNF43Q68DV7 783 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 GPAT2Q6NUI2 795 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 MYLK4Q86YV6 388 aaPredicted RBP12.22□□□□□ -0.45
SYNE2-207ENST00000458046 REPS2Q8NFH8 660 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 NSMCE1Q8WV22 266 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 SMC6Q96SB8 1091 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 SPON2Q9BUD6 331 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 IMPG2Q9BZV3 1241 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 MTMR12Q9C0I1 747 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 MYLK2Q9H1R3 596 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 ZWILCHQ9H900 591 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 NKIRAS2Q9NYR9 191 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 GGA3Q9NZ52 723 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 hCG_1818297A0A087WSY0 165 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 TGDSO95455 350 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 ZNF24P17028 368 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 HOXC12P31275 282 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 ARL2P36404 184 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 NAMPTP43490 491 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 OLFML1Q6UWY5 402 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 ASRGL1Q7L266 308 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 VSIG1Q86XK7 387 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms