RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 CALM2P0DP24 149 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 CALM3P0DP25 149 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 CHRNB1P11230 501 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 RPL17P18621 184 aaKnown RBP4.1□□□□□ -1.75
RBM39-220ENST00000455343 CXCL12P48061 93 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 CCR3P51677 355 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 SETQ01105 290 aaPredicted RBP4.1□□□□□ -1.75
RBM39-220ENST00000455343 SATB1Q01826 763 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 PRKCEQ02156 737 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 PTH1RQ03431 593 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 SIM2Q14190 667 aaPredicted RBP4.1□□□□□ -1.75
RBM39-220ENST00000455343 UGCGQ16739 394 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 USP41Q3LFD5 358 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 IL31Q6EBC2 164 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 TANGO2Q6ICL3 276 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 FUT10Q6P4F1 479 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 RTL10Q7L3V2 364 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 HEATR3Q7Z4Q2 680 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 RALYLQ86SE5 291 aaKnown RBP4.1□□□□□ -1.75
RBM39-220ENST00000455343 LONP2Q86WA8 852 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 PROSER1Q86XN7 944 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 TMTC2Q8N394 836 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 FANCBQ8NB91 859 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 CNNM3Q8NE01 707 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 ITFG1Q8TB96 612 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 LNX1Q8TBB1 728 aaPredicted RBP4.1□□□□□ -1.75
RBM39-220ENST00000455343 URGCPQ8TCY9 931 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 KCTD13Q8WZ19 329 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 DNASE1L2Q92874 299 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 ELSPBP1Q96BH3 223 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 B3GALT6Q96L58 329 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 FAM193BQ96PV7 902 aaPredicted RBP4.1□□□□□ -1.75
RBM39-220ENST00000455343 CLSTN3Q9BQT9 956 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 ZNF577Q9BSK1 485 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 GLT8D2Q9H1C3 349 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 MINDY3Q9H8M7 445 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 LMAN1LQ9HAT1 526 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 UBN1Q9NPG3 1134 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 GPR27Q9NS67 375 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 BARHL2Q9NY43 387 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 GDE1Q9NZC3 331 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 DNMT3BQ9UBC3 853 aaKnown RBP4.1□□□□□ -1.75
RBM39-220ENST00000455343 PPARGC1AQ9UBK2 798 aaKnown RBP4.1□□□□□ -1.75
RBM39-220ENST00000455343 RAB23Q9ULC3 237 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 LOXHD1Q8IVV2 1947 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 CNOT1A5YKK6 2376 aaKnown RBP4.1□□□□□ -1.75
RBM39-220ENST00000455343 COL4A3Q01955 1670 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 ITPR1Q14643 2758 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 CELSR3Q9NYQ7 3312 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 IGF2RP11717 2491 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 ESYT2A0FGR8 921 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 hCG_1984214I3L0E3 225 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 KRIT1O00522 736 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 ADAMTS3O15072 1205 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 ADAM12O43184 909 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 AKAP8O43823 692 aaKnown RBP4.09□□□□□ -1.75
RBM39-220ENST00000455343 RXRAP19793 462 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 FCARP24071 287 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 SFNP31947 248 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 OR1G1P47890 313 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 DNM2P50570 870 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 SCNN1GP51170 649 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 ADCY7P51828 1080 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 NAPAP54920 295 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 CREMQ03060 361 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 SRSF5Q13243 272 aaKnown RBP4.09□□□□□ -1.75
RBM39-220ENST00000455343 GNL2Q13823 731 aaKnown RBP4.09□□□□□ -1.75
RBM39-220ENST00000455343 RAB33AQ14088 237 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 ICAM4Q14773 271 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 SF3A2Q15428 464 aaKnown RBP4.09□□□□□ -1.75
RBM39-220ENST00000455343 CDSNQ15517 529 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 XKR3Q5GH77 459 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 STPG1Q5TH74 334 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 CATSPER4Q7RTX7 472 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 SRGAP1Q7Z6B7 1085 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 SGMS1Q86VZ5 419 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 RHPN2Q8IUC4 686 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 SPEM1Q8N4L4 309 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 KLHL36Q8N4N3 616 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 ZNF713Q8N859 430 aaPredicted RBP4.09□□□□□ -1.75
RBM39-220ENST00000455343 DTX3Q8N9I9 347 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 PIP4K2CQ8TBX8 421 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 FAM3CQ92520 227 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 SCLT1Q96NL6 688 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 GAD1Q99259 594 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 RIT2Q99578 217 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 KXD1Q9BQD3 176 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 COLEC11Q9BWP8 271 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 ZNF334Q9HCZ1 680 aaPredicted RBP4.09□□□□□ -1.75
RBM39-220ENST00000455343 SLC6A20Q9NP91 592 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 SUCLA2Q9P2R7 463 aaPredicted RBP4.09□□□□□ -1.75
RBM39-220ENST00000455343 FTSJ1Q9UET6 329 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 ADAM28Q9UKQ2 775 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 IPPQ9Y573 584 aa4.09□□□□□ -1.75
RBM39-220ENST00000455343 CCDC163A0A0D9SF12 145 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 TMEM150BA6NC51 233 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 CCDC69A6NI79 296 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 SLC27A2O14975 620 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 MSH4O15457 936 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 CCL16O15467 120 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms