RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 UBL4BQ8N7F7 174 aa17.35■□□□□ 0.37
LINC00963-208ENST00000454968 SERPINB11Q96P15 392 aa17.35■□□□□ 0.37
LINC00963-208ENST00000454968 TUBB2BQ9BVA1 445 aa17.35■□□□□ 0.37
LINC00963-208ENST00000454968 DZANK1Q9NVP4 752 aa17.35■□□□□ 0.37
LINC00963-208ENST00000454968 USTQ9Y2C2 406 aa17.35■□□□□ 0.37
LINC00963-208ENST00000454968 SAR1BQ9Y6B6 198 aa17.35■□□□□ 0.37
LINC00963-208ENST00000454968 I6L893 689 aaPredicted RBP17.34■□□□□ 0.37
LINC00963-208ENST00000454968 CCL16O15467 120 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 MOSPD3O75425 235 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 FGF19O95750 216 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 ATXN1P54253 815 aaKnown RBP17.34■□□□□ 0.37
LINC00963-208ENST00000454968 DEUP1Q05D60 604 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 PPP2R5DQ14738 602 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 HADHQ16836 314 aaKnown RBP17.34■□□□□ 0.37
LINC00963-208ENST00000454968 CDO1Q16878 200 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 CTC1Q2NKJ3 1217 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 TCEAL5Q5H9L2 206 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 PRSS36Q5K4E3 855 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 HECTD3Q5T447 861 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 TADA2BQ86TJ2 420 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 ELMOD1Q8N336 334 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 RASGEF1CQ8N431 466 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 EXD1Q8NHP7 514 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 RNF139Q8WU17 664 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 SFXN1Q9H9B4 322 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 L2HGDHQ9H9P8 463 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 ARHGEF38Q9NXL2 777 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 DNMT3BQ9UBC3 853 aaKnown RBP17.34■□□□□ 0.37
LINC00963-208ENST00000454968 TTC7AQ9ULT0 858 aaPredicted RBP17.34■□□□□ 0.37
LINC00963-208ENST00000454968 TLR6Q9Y2C9 796 aa17.34■□□□□ 0.37
LINC00963-208ENST00000454968 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.34■□□□□ 0.37
LINC00963-208ENST00000454968 C3orf70A6NLC5 250 aaPredicted RBP17.33■□□□□ 0.36
LINC00963-208ENST00000454968 ZNF487B1APH4 448 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 SOX1O00570 391 aaPredicted RBP17.33■□□□□ 0.36
LINC00963-208ENST00000454968 NRG2O14511 850 aaPredicted RBP17.33■□□□□ 0.36
LINC00963-208ENST00000454968 PRPSAP2O60256 369 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 XYLBO75191 536 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 RARAP10276 462 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 PTPN2P17706 415 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 CDC25CP30307 473 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 GBP1P32455 592 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 GTF2F1P35269 517 aaKnown RBP eCLIP17.33■□□□□ 0.361e-6■■■■□ 26.4
LINC00963-208ENST00000454968 RWDD2BP57060 319 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 RBM10P98175 930 aaKnown RBP17.33■□□□□ 0.36
LINC00963-208ENST00000454968 RING1Q06587 406 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 GRIN2CQ14957 1233 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 TAF12Q16514 161 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 BRMS1LQ5PSV4 323 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 CREG2Q8IUH2 290 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 HS6ST3Q8IZP7 471 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 PBKQ96KB5 322 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 CCSER2Q9H7U1 834 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 ASAH2Q9NR71 780 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 DDIT4Q9NX09 232 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 DDX56Q9NY93 547 aaKnown RBP17.33■□□□□ 0.36
LINC00963-208ENST00000454968 MTCH2Q9Y6C9 303 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 BRWD1Q9NSI6 2320 aa17.33■□□□□ 0.36
LINC00963-208ENST00000454968 KCNU1A8MYU2 1149 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 COCHO43405 550 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 TBX18O95935 607 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 GABRR2P28476 465 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 PTPN7P35236 360 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 CCR2P41597 374 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 ADAM15Q13444 863 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 ADGRE1Q14246 886 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 TRIP4Q15650 581 aaPredicted RBP17.32■□□□□ 0.36
LINC00963-208ENST00000454968 DPYSL2Q16555 572 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 ATP13A4Q4VNC1 1196 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 ARTNQ5T4W7 220 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 ERMARDQ5T6L9 678 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 GPR153Q6NV75 609 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 ADAM32Q8TC27 787 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 COG1Q8WTW3 980 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 SNRNP25Q9BV90 132 aaKnown RBP17.32■□□□□ 0.36
LINC00963-208ENST00000454968 PRDM12Q9H4Q4 367 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 FAM204AQ9H8W3 233 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 ANLNQ9NQW6 1124 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 HCFC1R1Q9NWW0 138 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 MTMR10Q9NXD2 777 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 MARCH2Q9P0N8 246 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 SFMBT1Q9UHJ3 866 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 DNMT3LQ9UJW3 386 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 CDC23Q9UJX2 597 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 FZD10Q9ULW2 581 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 HBS1LQ9Y450 684 aaKnown RBP17.32■□□□□ 0.36
LINC00963-208ENST00000454968 MRFAP1Q9Y605 127 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 NUP210Q8TEM1 1887 aaPredicted RBP17.32■□□□□ 0.36
LINC00963-208ENST00000454968 DOCK4Q8N1I0 1966 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 DENND4AQ7Z401 1863 aa17.32■□□□□ 0.36
LINC00963-208ENST00000454968 CLUHO75153 1309 aa17.31■□□□□ 0.36
LINC00963-208ENST00000454968 CCDC195A0A1B0GUA6 201 aa17.31■□□□□ 0.36
LINC00963-208ENST00000454968 KCNK3O14649 394 aa17.31■□□□□ 0.36
LINC00963-208ENST00000454968 RHOP08100 348 aa17.31■□□□□ 0.36
LINC00963-208ENST00000454968 PYGMP11217 842 aa17.31■□□□□ 0.36
LINC00963-208ENST00000454968 ADRA1BP35368 520 aa17.31■□□□□ 0.36
LINC00963-208ENST00000454968 ATP5C1P36542 298 aaKnown RBP17.31■□□□□ 0.36
LINC00963-208ENST00000454968 KPNA1P52294 538 aaPredicted RBP17.31■□□□□ 0.36
LINC00963-208ENST00000454968 COPS2P61201 443 aa17.31■□□□□ 0.36
LINC00963-208ENST00000454968 SEMA3BQ13214 749 aa17.31■□□□□ 0.36
LINC00963-208ENST00000454968 RSRC2Q7L4I2 434 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms