RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 MMRN2Q9H8L6 949 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 MARK1Q9P0L2 795 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 MAGEC2Q9UBF1 373 aaPredicted RBP5.19□□□□□ -1.58
RIF1-207ENST00000454583 FAM153AQ9UHL3 310 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 SRRM3A6NNA2 597 aaPredicted RBP5.19□□□□□ -1.58
RIF1-207ENST00000454583 SLC38A8A6NNN8 435 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 F8VP50 259 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 ZMPSTE24O75844 475 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 MMP2P08253 660 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 CD48P09326 243 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 SLC6A4P31645 630 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 YARSP54577 528 aaKnown RBP5.19□□□□□ -1.58
RIF1-207ENST00000454583 AIF1P55008 147 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 PPP1R2P3Q6NXS1 205 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 ANKS3Q6ZW76 656 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 PPM1KQ8N3J5 372 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 TLCD1Q96CP7 247 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 SLC22A12Q96S37 553 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 BEGAINQ9BUH8 593 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 OSBPL2Q9H1P3 480 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 RETREG1Q9H6L5 497 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 TMPRSS4Q9NRS4 437 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 hCG_1818297A0A087WSY0 165 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 RNF103O00237 685 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 LATS1O95835 1130 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 CISD3P0C7P0 127 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 ATP2A2P16615 1042 aaKnown RBP5.19□□□□□ -1.58
RIF1-207ENST00000454583 SYN1P17600 705 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 GCAP28676 217 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 BPIFB4P59827 614 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 C2orf54Q08AI8 447 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 KLHL30Q0D2K2 578 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 MYO1EQ12965 1108 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 CASP8Q14790 479 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 CDKN3Q16667 212 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 USP41Q3LFD5 358 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 C2CD6Q53TS8 623 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 FAM47CQ5HY64 1035 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 NCBP2-AS2Q69YL0 99 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 OVOS1Q6IE37 1185 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 GLB1LQ6UWU2 654 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 USP37Q86T82 979 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 NPWQ8N729 165 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 EFHBQ8N7U6 833 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 PRELID2Q8N945 189 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 MAML1Q92585 1016 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 CASP10Q92851 521 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 PBKQ96KB5 322 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 PSMB7Q99436 277 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 GUCA1BQ9UMX6 200 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 RWDD3Q9Y3V2 267 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 INSL5Q9Y5Q6 135 aa5.19□□□□□ -1.58
RIF1-207ENST00000454583 ATXN2Q99700 1313 aaKnown RBP5.19□□□□□ -1.58
RIF1-207ENST00000454583 IRAK2O43187 625 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 URI1O94763 535 aaPredicted RBP5.18□□□□□ -1.58
RIF1-207ENST00000454583 PENKP01210 267 aaPredicted RBP5.18□□□□□ -1.58
RIF1-207ENST00000454583 CA3P07451 260 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 PYGMP11217 842 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 BYSLQ13895 437 aaKnown RBP5.18□□□□□ -1.58
RIF1-207ENST00000454583 SGO2Q562F6 1265 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 OTOP2Q7RTS6 562 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 RHOT2Q8IXI1 618 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 SPPL2BQ8TCT7 592 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 MRPL38Q96DV4 380 aaKnown RBP5.18□□□□□ -1.58
RIF1-207ENST00000454583 CCDC42Q96M95 316 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 FNBP1Q96RU3 617 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 KCTD15Q96SI1 283 aaPredicted RBP5.18□□□□□ -1.58
RIF1-207ENST00000454583 UBE2OQ9C0C9 1292 aaKnown RBP5.18□□□□□ -1.58
RIF1-207ENST00000454583 GOLPH3Q9H4A6 298 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 SPG21Q9NZD8 308 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 SLC12A6Q9UHW9 1150 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 LCMT1Q9UIC8 334 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 PCDHB4Q9Y5E5 795 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 TIMM13Q9Y5L4 95 aaPredicted RBP5.18□□□□□ -1.58
RIF1-207ENST00000454583 ALG6Q9Y672 507 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 ZSCAN5CA6NGD5 496 aaPredicted RBP5.18□□□□□ -1.58
RIF1-207ENST00000454583 NT5C1B-RDH14C9J2C7 533 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 TRIM66O15016 1216 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 LINC01565O15544 149 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 RAD51CO43502 376 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 GLUD2P49448 558 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 PDE6CP51160 858 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 DLX2Q07687 328 aaPredicted RBP5.18□□□□□ -1.58
RIF1-207ENST00000454583 FCHO2Q0JRZ9 810 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 MTMR3Q13615 1198 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 RAPGEF1Q13905 1077 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 PPP2R5DQ14738 602 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 ZNF658BQ4V348 819 aaPredicted RBP5.18□□□□□ -1.58
RIF1-207ENST00000454583 NAA35Q5VZE5 725 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 CXorf57Q6NSI4 855 aaKnown RBP5.18□□□□□ -1.58
RIF1-207ENST00000454583 ETFBKMTQ8IXQ9 262 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 SMRP1Q8NCR6 262 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 STKLD1Q8NE28 680 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 ANKRD20A12PQ8NF67 263 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 SHKBP1Q8TBC3 707 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 ASIC4Q96FT7 647 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 RCOR3Q9P2K3 495 aaPredicted RBP5.18□□□□□ -1.58
RIF1-207ENST00000454583 EPS15L1Q9UBC2 864 aa5.18□□□□□ -1.58
RIF1-207ENST00000454583 CHORDC1Q9UHD1 332 aaPredicted RBP5.18□□□□□ -1.58
RIF1-207ENST00000454583 ZMYND8Q9ULU4 1186 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms