RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 ELP4Q96EB1 424 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 ASB2Q96Q27 587 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 OR14A2Q96R54 314 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 OSBPL9Q96SU4 736 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 MNTQ99583 582 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 CLSTN3Q9BQT9 956 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 TAOK3Q9H2K8 898 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 TTYH1Q9H313 450 aaPredicted RBP4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 STN1Q9H668 368 aaKnown RBP4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 ZFP64Q9NPA5 681 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 SEMA4BQ9NPR2 832 aaPredicted RBP4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 KRT84Q9NSB2 600 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 RXFP3Q9NSD7 469 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 SLC25A10Q9UBX3 287 aaPredicted RBP4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 RAB21Q9UL25 225 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 NFU1Q9UMS0 254 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 CAMK2AQ9UQM7 478 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 KDM3AQ9Y4C1 1321 aa4.66□□□□□ -1.66
HMGN3P1-201ENST00000453847 SYNDIG1LA6NDD5 238 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 MUSKO15146 869 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 FOXS1O43638 330 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 ADRB2P07550 413 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 CYP3A4P08684 503 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 UBL4AP11441 157 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 DRD1P21728 446 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 MCM5P33992 734 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 THBS4P35443 961 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 KRT20P35900 424 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 RBM6P78332 1123 aaKnown RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 FAM189BP81408 668 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 TUBB3Q13509 450 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 EIF4A2Q14240 407 aaKnown RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 GEN1Q17RS7 908 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 P3H1Q32P28 736 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 ZNF385BQ569K4 471 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 ZNF569Q5MCW4 686 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 LIPMQ5VYY2 423 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 TCTN3Q6NUS6 607 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 INO80CQ6PI98 192 aaPredicted RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 ARHGEF18Q6ZSZ5 1173 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 PXKQ7Z7A4 578 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 DIS3L2Q8IYB7 885 aaKnown RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 PTGR2Q8N8N7 351 aaPredicted RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 FSIP1Q8NA03 581 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 OSCP1Q8WVF1 389 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 MIEF2Q96C03 454 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 NSUN4Q96CB9 384 aaKnown RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 TRMT61AQ96FX7 289 aaKnown RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 MASTLQ96GX5 879 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 REXO5Q96IC2 774 aaKnown RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 LENG8Q96PV6 779 aaPredicted RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 PPP1R10Q96QC0 940 aaKnown RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 REXO4Q9GZR2 422 aaKnown RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 CCDC68Q9H2F9 335 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 TRPC5Q9UL62 973 aaPredicted RBP4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 SLC30A1Q9Y6M5 507 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 DUSP10Q9Y6W6 482 aa4.65□□□□□ -1.67
HMGN3P1-201ENST00000453847 CCDC187A0A096LP49 1063 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 SCO2A0A1W2PP80 73 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 MARCH11A6NNE9 402 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 AGAP14A8MT82 685 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 PEX12O00623 359 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 P4HA2O15460 535 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 SPRY2O43597 315 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 RAD17O75943 681 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 CFIP05156 583 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 CLEC3BP05452 202 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 HLA-DOAP06340 250 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 LYL1P12980 280 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 LAMP2P13473 410 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 GLULP15104 373 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 PORP16435 677 aaPredicted RBP4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 ALOX12P18054 663 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 ITPKBP27987 946 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 ICAM3P32942 547 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 MLH1P40692 756 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 SCNN1GP51170 649 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 NAP1L1P55209 391 aaKnown RBP4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 RPS7P62081 194 aaKnown RBP4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 RPP30P78346 268 aaKnown RBP4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 FPGSQ05932 587 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 DEUP1Q05D60 604 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 CAMK1Q14012 370 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 SEC23BQ15437 767 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 NFIL3Q16649 462 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 UBXN11Q5T124 520 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 DENND1BQ6P3S1 775 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 MAVSQ7Z434 540 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 ANKRD23Q86SG2 305 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 D2HGDHQ8N465 521 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 OVCA2Q8WZ82 227 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 TMEM125Q96AQ2 219 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 FAM136AQ96C01 138 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 PERPQ96FX8 193 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 SLC25A18Q9H1K4 315 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 ZNF768Q9H5H4 540 aaKnown RBP4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 PCDHB16Q9NRJ7 776 aa4.64□□□□□ -1.67
HMGN3P1-201ENST00000453847 SEPT11Q9NVA2 429 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms