RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 SSU72P8A0A1W2PR75 194 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 E5RJQ4 531 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 AP5Z1O43299 807 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 TLR5O60602 858 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 HSF2BPO75031 334 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 ABL1P00519 1130 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 UNGP13051 313 aaPredicted RBP9.12□□□□□ -0.95
COL28A1-205ENST00000453441 LCP1P13796 627 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 CHRNB2P17787 502 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 MMP8P22894 467 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 ATP5C1P36542 298 aaKnown RBP9.12□□□□□ -0.95
COL28A1-205ENST00000453441 MTA1Q13330 715 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 HTR4Q13639 388 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 PTPN21Q16825 1174 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 CLEC16AQ2KHT3 1053 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 NAA35Q5VZE5 725 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 MSANTD2Q6P1R3 559 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 ARCQ7LC44 396 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 PASD1Q8IV76 773 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 GJD3Q8N144 294 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 WDTC1Q8N5D0 677 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 MAB21L3Q8N8X9 362 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 ADAMTS19Q8TE59 1207 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 RNF139Q8WU17 664 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 SLC20A1Q8WUM9 679 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 ING5Q8WYH8 240 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 MCRS1Q96EZ8 462 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 CPXM1Q96SM3 734 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 SYT11Q9BT88 431 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 SLC46A2Q9BY10 475 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 HAUS4Q9H6D7 363 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 TRPC7Q9HCX4 862 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 ABHD10Q9NUJ1 306 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 TDP1Q9NUW8 608 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 SEPT11Q9NVA2 429 aaKnown RBP9.12□□□□□ -0.95
COL28A1-205ENST00000453441 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.12□□□□□ -0.95
COL28A1-205ENST00000453441 THG1LQ9NWX6 298 aaKnown RBP9.12□□□□□ -0.95
COL28A1-205ENST00000453441 DNMT3LQ9UJW3 386 aa9.12□□□□□ -0.95
COL28A1-205ENST00000453441 HELZP42694 1942 aaKnown RBP9.11□□□□□ -0.95
COL28A1-205ENST00000453441 XIRP2A4UGR9 3374 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 A0A1W2PQH9 124 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 SLC9A3R1O14745 358 aaPredicted RBP9.11□□□□□ -0.95
COL28A1-205ENST00000453441 PAPSS1O43252 624 aaPredicted RBP9.11□□□□□ -0.95
COL28A1-205ENST00000453441 ADCY5O95622 1261 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 CALCAP01258 141 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 LTFP02788 710 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 MYBL1P10243 752 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 RARGP13631 454 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 GJA1P17302 382 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 DESP17661 470 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 MRE11P49959 708 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 GSDMDP57764 484 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 YWHAZP63104 245 aaKnown RBP9.11□□□□□ -0.95
COL28A1-205ENST00000453441 COG7P83436 770 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 PFKPQ01813 784 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 SLC6A3Q01959 620 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 TDGQ13569 410 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 PTPN20Q4JDL3 420 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 FAM78AQ5JUQ0 283 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 BSPRYQ5W0U4 402 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 HGSNATQ68CP4 663 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 TXNDC8Q6A555 127 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 ACAD10Q6JQN1 1059 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 RSRC2Q7L4I2 434 aaKnown RBP9.11□□□□□ -0.95
COL28A1-205ENST00000453441 SLC26A9Q7LBE3 791 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 SCD5Q86SK9 330 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 ARID3BQ8IVW6 561 aaPredicted RBP9.11□□□□□ -0.95
COL28A1-205ENST00000453441 YAF2Q8IY57 180 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 UBALD2Q8IYN6 164 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 MEIOBQ8N635 442 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 FEZF2Q8TBJ5 459 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 ANP32BQ92688 251 aaKnown RBP9.11□□□□□ -0.95
COL28A1-205ENST00000453441 PANX2Q96RD6 677 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 UHRF1Q96T88 793 aaPredicted RBP9.11□□□□□ -0.95
COL28A1-205ENST00000453441 DEF6Q9H4E7 631 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 GRPEL1Q9HAV7 217 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 NMUR1Q9HB89 426 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 POPDC2Q9HBU9 364 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 CHORDC1Q9UHD1 332 aaPredicted RBP9.11□□□□□ -0.95
COL28A1-205ENST00000453441 CYTH4Q9UIA0 394 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 SORCS3Q9UPU3 1222 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 HBS1LQ9Y450 684 aaKnown RBP9.11□□□□□ -0.95
COL28A1-205ENST00000453441 PCDHB9Q9Y5E1 797 aa9.11□□□□□ -0.95
COL28A1-205ENST00000453441 TCF20Q9UGU0 1960 aaKnown RBP9.11□□□□□ -0.95
COL28A1-205ENST00000453441 E2F8A0AVK6 867 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 ANKRD62A6NC57 917 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 C2orf78A6NCI8 922 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 YJEFN3A6XGL0 299 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 E7ENQ6 273 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 CAPN9O14815 690 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 COCHO43405 550 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 RTN2O75298 545 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 ERBB2P04626 1255 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 MBL2P11226 248 aaPredicted RBP9.1□□□□□ -0.95
COL28A1-205ENST00000453441 PSMC3P17980 439 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 FCARP24071 287 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 FCHO2Q0JRZ9 810 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 USP4Q13107 963 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 ARHGAP29Q52LW3 1261 aa9.1□□□□□ -0.95
COL28A1-205ENST00000453441 C10orf120Q5SQS8 335 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms