RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 LZTS1Q9Y250 596 aa6.25□□□□□ -1.41
SDC4P-201ENST00000453285 R3HDM2Q9Y2K5 976 aaKnown RBP6.25□□□□□ -1.41
SDC4P-201ENST00000453285 IRAK3Q9Y616 596 aa6.25□□□□□ -1.41
SDC4P-201ENST00000453285 CHD7Q9P2D1 2997 aa6.25□□□□□ -1.41
SDC4P-201ENST00000453285 ANKRD36A6QL64 1941 aa6.25□□□□□ -1.41
SDC4P-201ENST00000453285 CHD9Q3L8U1 2897 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 TARSL2A2RTX5 802 aaKnown RBP6.24□□□□□ -1.41
SDC4P-201ENST00000453285 CCDC85CA6NKD9 419 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 ZNF487B1APH4 448 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 IRAK2O43187 625 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 TJP3O95049 919 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 F9P00740 461 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 RB1P06400 928 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 H2AFXP16104 143 aaPredicted RBP6.24□□□□□ -1.41
SDC4P-201ENST00000453285 DESP17661 470 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 CHRNA3P32297 505 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 CTNNB1P35222 781 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 ADRA1BP35368 520 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 COILP38432 576 aaPredicted RBP6.24□□□□□ -1.41
SDC4P-201ENST00000453285 CETN2P41208 172 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 KCNJ1P48048 391 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 CDH6P55285 790 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 SLC7A5Q01650 507 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 SCAPQ12770 1279 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 TAF10Q12962 218 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 SEMA3BQ13214 749 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 NME3Q13232 169 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 SMC1AQ14683 1233 aaKnown RBP6.24□□□□□ -1.41
SDC4P-201ENST00000453285 CCNG2Q16589 344 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 KCTD19Q17RG1 926 aaPredicted RBP6.24□□□□□ -1.41
SDC4P-201ENST00000453285 ANKRD20A8PQ5CZ79 823 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 SNX30Q5VWJ9 437 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 BTBD8Q5XKL5 378 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 KAZNQ674X7 775 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 C8orf74Q6P047 294 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 WDR93Q6P2C0 686 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 BBS12Q6ZW61 710 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 PSTKQ8IV42 348 aaKnown RBP6.24□□□□□ -1.41
SDC4P-201ENST00000453285 TCEAL8Q8IYN2 117 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 PYROXD2Q8N2H3 581 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 ARHGAP18Q8N392 663 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 ZNF276Q8N554 614 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 PQLC3Q8N755 202 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 MRPL43Q8N983 215 aaKnown RBP6.24□□□□□ -1.41
SDC4P-201ENST00000453285 KCTD6Q8NC69 237 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 PCDH19Q8TAB3 1148 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 POF1BQ8WVV4 589 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 C1orf54Q8WWF1 131 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 ATG4AQ8WYN0 398 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 SLCO2A1Q92959 643 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 FBXO32Q969P5 355 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 MAGOHBQ96A72 148 aaKnown RBP6.24□□□□□ -1.41
SDC4P-201ENST00000453285 NTAN1Q96AB6 310 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 SLC39A13Q96H72 371 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 MYRFLQ96LU7 910 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 GDF15Q99988 308 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 TRIM62Q9BVG3 475 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 UBE2OQ9C0C9 1292 aaKnown RBP6.24□□□□□ -1.41
SDC4P-201ENST00000453285 SMOC2Q9H3U7 446 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 CYP4F11Q9HBI6 524 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.24□□□□□ -1.41
SDC4P-201ENST00000453285 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.24□□□□□ -1.41
SDC4P-201ENST00000453285 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.24□□□□□ -1.41
SDC4P-201ENST00000453285 ARHGEF38Q9NXL2 777 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 CLIC5Q9NZA1 410 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.24□□□□□ -1.41
SDC4P-201ENST00000453285 CWC15Q9P013 229 aaKnown RBP6.24□□□□□ -1.41
SDC4P-201ENST00000453285 SFMBT1Q9UHJ3 866 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 AMACRQ9UHK6 382 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 NUDT5Q9UKK9 219 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 MTUS1Q9ULD2 1270 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 MAFFQ9ULX9 164 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 AP4E1Q9UPM8 1137 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 SSX2IPQ9Y2D8 614 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 RWDD3Q9Y3V2 267 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 YIPF1Q9Y548 306 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 MIA3Q5JRA6 1907 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 DOCK8Q8NF50 2099 aa6.24□□□□□ -1.41
SDC4P-201ENST00000453285 NUP210Q8TEM1 1887 aaPredicted RBP6.24□□□□□ -1.41
SDC4P-201ENST00000453285 TRANK1O15050 2925 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 SYNJ2BP-COX16A0A087WUM0 186 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 GOLGA6L10A0A0M3HER8 536 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 FAM187AA6NFU0 413 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 ZSCAN5CA6NGD5 496 aaPredicted RBP6.23□□□□□ -1.41
SDC4P-201ENST00000453285 C2orf71A6NGG8 1288 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 HIDE1A8MVS5 230 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 KCNU1A8MYU2 1149 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 FAM72CH0Y354 149 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 GRM6O15303 877 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 TTI1O43156 1089 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 TGM5O43548 720 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 LIASO43766 372 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 CST8O60676 142 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 ZMYND10O75800 440 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 TBX18O95935 607 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 SPATA31D3P0C874 917 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 CSH1P0DML2 217 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 CSH2P0DML3 217 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 RARGP13631 454 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 AMPD1P23109 780 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms