RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 GSDMDP57764 484 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 BPIFB4P59827 614 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 MESP2Q0VG99 397 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 TBX2Q13207 712 aaPredicted RBP17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 C2orf27AQ580R0 203 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 SCD5Q86SK9 330 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 WDR5BQ86VZ2 330 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 KIAA1958Q8N8K9 716 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 NAT16Q8N8M0 369 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 SHC3Q92529 594 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 KREMEN1Q96MU8 473 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 HHIPQ96QV1 700 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 PNPLA8Q9NP80 782 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 ZNHIT6Q9NWK9 470 aaKnown RBP17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 NAGPAQ9UK23 515 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 ADH1CP00326 375 aa17.87■□□□□ 0.45
PRPF40A-204ENST00000450303 CD19P15391 556 aa17.87■□□□□ 0.45
PRPF40A-204ENST00000450303 SOX5P35711 763 aa17.87■□□□□ 0.45
PRPF40A-204ENST00000450303 KDSRQ06136 332 aa17.87■□□□□ 0.45
PRPF40A-204ENST00000450303 GOLGA7BQ2TAP0 167 aa17.87■□□□□ 0.45
PRPF40A-204ENST00000450303 SFMBT2Q5VUG0 894 aa17.87■□□□□ 0.45
PRPF40A-204ENST00000450303 ARHGAP17Q68EM7 881 aa17.87■□□□□ 0.45
PRPF40A-204ENST00000450303 CEP68Q76N32 757 aa17.87■□□□□ 0.45
PRPF40A-204ENST00000450303 TMEM25Q86YD3 366 aa17.87■□□□□ 0.45
PRPF40A-204ENST00000450303 OR8K1Q8NGG5 319 aa17.87■□□□□ 0.45
PRPF40A-204ENST00000450303 KAT5Q92993 513 aa17.87■□□□□ 0.45
PRPF40A-204ENST00000450303 CYLDQ9NQC7 956 aa17.87■□□□□ 0.45
PRPF40A-204ENST00000450303 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.87■□□□□ 0.45
PRPF40A-204ENST00000450303 EML5Q05BV3 1969 aa17.87■□□□□ 0.45
PRPF40A-204ENST00000450303 F8VZ95 297 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 TULP2O00295 520 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 FOXN3O00409 490 aaPredicted RBP17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 FERP16591 822 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 HOXA6P31267 233 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 JAM2P57087 298 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 GAD2Q05329 585 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 DMC1Q14565 340 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 ANO4Q32M45 955 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 C10orf120Q5SQS8 335 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 TMEM270Q6UE05 265 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 PIGZQ86VD9 579 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 TTC30AQ86WT1 665 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 CCDC33Q8N5R6 958 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 ANKRD52Q8NB46 1076 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 UBA3Q8TBC4 463 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 BAP1Q92560 729 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 NDRG1Q92597 394 aaKnown RBP17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 SYN2Q92777 582 aaPredicted RBP17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 SECISBP2LQ93073 1101 aaKnown RBP17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 PNKPQ96T60 521 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 AJAP1Q9UKB5 411 aaPredicted RBP17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 GMEB2Q9UKD1 530 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 USP3Q9Y6I4 520 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 RALGAPA1Q6GYQ0 2036 aa17.86■□□□□ 0.45
PRPF40A-204ENST00000450303 LRRC53A6NM62 1247 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 MFAP3LO75121 409 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 FRYLO94915 3013 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 CALCAP01258 141 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 CNR2P34972 360 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 ID4P47928 161 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 PTK2Q05397 1052 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 PDE4CQ08493 712 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 ASIC2Q16515 512 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 SGO2Q562F6 1265 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 EMC10Q5UCC4 262 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 HTR3DQ70Z44 454 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 SYT13Q7L8C5 426 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 CCDC186Q7Z3E2 898 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 SDK1Q7Z5N4 2213 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 MIB1Q86YT6 1006 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 FAM71AQ8IYT1 594 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 UBR7Q8N806 425 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 RBBP8NLQ8NC74 664 aaPredicted RBP17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 USP33Q8TEY7 942 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 OTUB2Q96DC9 234 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 PARD6AQ9NPB6 346 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 ZDHHC4Q9NPG8 344 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 ARHGEF4Q9NR80 690 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 SPHK2Q9NRA0 654 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 DNMT3LQ9UJW3 386 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 TSPAN16Q9UKR8 245 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 KIAA1257Q9ULG3 409 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 USP18Q9UMW8 372 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 CNTN6Q9UQ52 1028 aa17.85■□□□□ 0.45
PRPF40A-204ENST00000450303 RNF225M0QZC1 329 aaPredicted RBP17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 NRDCO43847 1150 aa17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 GREM1O60565 184 aa17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 GFPT2O94808 682 aa17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 KAT7O95251 611 aa17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 APODP05090 189 aa17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 HMBSP08397 361 aa17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 PAEPP09466 180 aa17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 RALAP11233 206 aa17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 TIE1P35590 1138 aa17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 TKTL1P51854 596 aa17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 ADKP55263 362 aaKnown RBP17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 SPEM2Q0P670 501 aa17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 LAIR1Q6GTX8 287 aa17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 TPGS1Q6ZTW0 290 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms