RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 LILRA2Q8N149 483 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 LMO3Q8TAP4 145 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 CLP1Q92989 425 aaKnown RBP8.9□□□□□ -0.98
LSM5-208ENST00000450169 VTI1AQ96AJ9 217 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 COG8Q96MW5 612 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 TMEM47Q9BQJ4 181 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 KLHL25Q9H0H3 589 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 CDH19Q9H159 772 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 IKZF4Q9H2S9 585 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 RPF2Q9H7B2 306 aaKnown RBP8.9□□□□□ -0.98
LSM5-208ENST00000450169 C10orf88Q9H8K7 445 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 XPNPEP1Q9NQW7 623 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 KCNQ5Q9NR82 932 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 QPCTLQ9NXS2 382 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 SIRPGQ9P1W8 387 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 DNM3Q9UQ16 869 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 SLC27A5Q9Y2P5 690 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 PCDHB2Q9Y5E7 798 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 A0A1W2PPW3 197 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 LIASO43766 372 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 MED24O75448 989 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 TSPY3P0CV98 308 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 TSPY8P0CW00 308 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 EIF2AK2P19525 551 aaKnown RBP8.89□□□□□ -0.99
LSM5-208ENST00000450169 CD247P20963 164 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 CDH15P55291 814 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 CLDN10P78369 228 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 BNIP3Q12983 259 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 TIGD2Q4W5G0 525 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 FGD3Q5JSP0 725 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 RNF19BQ6ZMZ0 732 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 CDHR3Q6ZTQ4 885 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 FRMD7Q6ZUT3 714 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 EEPD1Q7L9B9 569 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 ITIH5Q86UX2 942 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 RETREG3Q86VR2 466 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 BPHLQ86WA6 291 aaPredicted RBP8.89□□□□□ -0.99
LSM5-208ENST00000450169 SLC15A4Q8N697 577 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 ZNF384Q8TF68 577 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 WNK4Q96J92 1243 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 GPR101Q96P66 508 aaPredicted RBP8.89□□□□□ -0.99
LSM5-208ENST00000450169 UIMC1Q96RL1 719 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 TDRD1Q9BXT4 1180 aaKnown RBP8.89□□□□□ -0.99
LSM5-208ENST00000450169 IFT122Q9HBG6 1241 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 ZFYVE28Q9HCC9 887 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 OLAHQ9NV23 265 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 STK39Q9UEW8 545 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 FKBPLQ9UIM3 349 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 CNOT11Q9UKZ1 510 aaKnown RBP8.89□□□□□ -0.99
LSM5-208ENST00000450169 DNPEPQ9ULA0 475 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 APOBEC2Q9Y235 224 aaKnown RBP8.89□□□□□ -0.99
LSM5-208ENST00000450169 FRMD4BQ9Y2L6 1034 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 IFT52Q9Y366 437 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 AP4S1Q9Y587 144 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 CORINQ9Y5Q5 1042 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.89□□□□□ -0.99
LSM5-208ENST00000450169 KIAA1551Q9HCM1 1747 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 MAST2Q6P0Q8 1798 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 SNNO75324 88 aaPredicted RBP8.89□□□□□ -0.99
LSM5-208ENST00000450169 TBCAO75347 108 aaKnown RBP8.89□□□□□ -0.99
LSM5-208ENST00000450169 KRT75O95678 551 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 CHEK2O96017 543 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 CAPNS1P04632 268 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 BMP3P12645 472 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 GABRB3P28472 473 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 L1CAMP32004 1257 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 PSEN2P49810 448 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 FMO1Q01740 532 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 FAAP100Q0VG06 881 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 PTP4A2Q12974 167 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 STX3Q13277 289 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 PEX6Q13608 980 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 FLOT2Q14254 428 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 OXA1LQ15070 435 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 FRA10AC1Q70Z53 315 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 LYSMD3Q7Z3D4 306 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 NUDCD3Q8IVD9 361 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 CADM3Q8N126 398 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 FIBCD1Q8N539 461 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 TMCO5AQ8N6Q1 288 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 FBXO36Q8NEA4 188 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 ZNF420Q8TAQ5 688 aaPredicted RBP8.89□□□□□ -0.99
LSM5-208ENST00000450169 TFB1MQ8WVM0 346 aaKnown RBP8.89□□□□□ -0.99
LSM5-208ENST00000450169 KBTBD7Q8WVZ9 684 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 PKP2Q99959 881 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 PSD2Q9BQI7 771 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 APOL6Q9BWW8 343 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 C20orf27Q9GZN8 174 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 STN1Q9H668 368 aaKnown RBP8.89□□□□□ -0.99
LSM5-208ENST00000450169 GINM1Q9NU53 330 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 DAPK2Q9UIK4 370 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 POU2F3Q9UKI9 436 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 ARHGAP26Q9UNA1 814 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 SLC8A2Q9UPR5 921 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 SPATA31A5Q5VU36 1347 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 SPATA31A6Q5VVP1 1343 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 SPATA31A7Q8IWB4 1347 aa8.89□□□□□ -0.99
LSM5-208ENST00000450169 LOC100653049A0A140TA62 436 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 SLC26A4O43511 780 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 KRT34O76011 436 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms