RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 VTA1Q9NP79 307 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 SMPD4Q9NXE4 827 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 ITGB6P18564 788 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 PSEN2P49810 448 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 OVGP1Q12889 678 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 FAM83AQ86UY5 434 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 CYP4Z1Q86W10 505 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 GPAMQ9HCL2 828 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 KRT84Q9NSB2 600 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 TDRKHQ9Y2W6 561 aaKnown RBP14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 E9PCH4 1651 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 ALBP02768 609 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 TFE3P19532 575 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 DMPKQ09013 629 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 ADIGQ0VDE8 80 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 ITGA9Q13797 1035 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 ACOX1Q15067 660 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 FNDC3BQ53EP0 1204 aaKnown RBP14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 SLC27A1Q6PCB7 646 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 COLGALT1Q8NBJ5 622 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 SMARCD1Q96GM5 515 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 KIAA1683Q9H0B3 1180 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 BARX2Q9UMQ3 279 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 CLK1P49759 484 aaKnown RBP14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 MAPK7Q13164 816 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 CSHL1Q14406 222 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 PTPAQ15257 358 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 TMEM121Q9BTD3 319 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 CTNNAL1Q9UBT7 734 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 NCKAP1Q9Y2A7 1128 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 USP1O94782 785 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 TGFB3P10600 412 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 CCNG1P51959 295 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 NDST1P52848 882 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 FSCN1Q16658 493 aaKnown RBP14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 ILDR2Q71H61 639 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 KIF2BQ8N4N8 673 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 ARIH1Q9Y4X5 557 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 TRPV2Q9Y5S1 764 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 BCORL1Q5H9F3 1711 aa14.38□□□□□ -0.11
RAPGEF3-205ENST00000449771 VIL1P09327 827 aaKnown RBP14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 OR1E1P30953 314 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 LRRC6Q86X45 466 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 CASKIN2Q8WXE0 1202 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 NLNQ9BYT8 704 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 SEMA6BQ9H3T3 888 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 C10orf88Q9H8K7 445 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 DMAP1Q9NPF5 467 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 SPG21Q9NZD8 308 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 PDP2Q9P2J9 529 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 TMCC3Q9ULS5 477 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 RRM1P23921 792 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 ACVR2BQ13705 512 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 C11orf63Q6NUN7 778 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 OLFML1Q6UWY5 402 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 GPC2Q8N158 579 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 COQ7Q99807 217 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 MFSD1Q9H3U5 465 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 ATP13A1Q9HD20 1204 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 RBM22Q9NW64 420 aaKnown RBP eCLIP14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 UXTQ9UBK9 157 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 TSPAN16Q9UKR8 245 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 CD44P16070 742 aaKnown RBP14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 IGFBP4P22692 258 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 YWHAQP27348 245 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 IRAK1P51617 712 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 DNAJC3Q13217 504 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 MARC1Q5VT66 337 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 RETSATQ6NUM9 610 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 SPIRE2Q8WWL2 714 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 AHCYL2Q96HN2 611 aaKnown RBP14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 P2RX7Q99572 595 aaKnown RBP14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 ELOVL6Q9H5J4 265 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 A0A087X0T9 212 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 RAMP2O60895 175 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 TOMM70O94826 608 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 FAM228BP0C875 321 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 CYP2A7P20853 494 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 HSD17B3P37058 310 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 NFYCQ13952 458 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 SLC39A12Q504Y0 691 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 PACSIN1Q9BY11 444 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 VANGL2Q9ULK5 521 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 CCNT2O60583 730 aaKnown RBP14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 RBP1P09455 135 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 HIRAP54198 1017 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 ADGRA1Q86SQ6 560 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 FAM9CQ8IZT9 166 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 EPS8L3Q8TE67 593 aaKnown RBP14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 ACOX2Q99424 681 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 RNF208Q9H0X6 261 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 MIEF1Q9NQG6 463 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 CYP39A1Q9NYL5 469 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 SNX8Q9Y5X2 465 aa14.37□□□□□ -0.11
RAPGEF3-205ENST00000449771 PDZK1P1A8MUH7 402 aa14.36□□□□□ -0.11
RAPGEF3-205ENST00000449771 ZW10O43264 779 aa14.36□□□□□ -0.11
RAPGEF3-205ENST00000449771 MICAL2O94851 1124 aa14.36□□□□□ -0.11
RAPGEF3-205ENST00000449771 RTN3O95197 1032 aaPredicted RBP14.36□□□□□ -0.11
RAPGEF3-205ENST00000449771 AXLP30530 894 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms