RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 GOLGA7BQ2TAP0 167 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 MAP7D1Q3KQU3 841 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 EGFLAMQ63HQ2 1017 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 RSRC2Q7L4I2 434 aaKnown RBP14.38□□□□□ -0.11
TOM1-211ENST00000449508 TMEFF1Q8IYR6 380 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 CHPFQ8IZ52 775 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 SLC35C1Q96A29 364 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 ERLEC1Q96DZ1 483 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 DHTKD1Q96HY7 919 aaPredicted RBP14.38□□□□□ -0.11
TOM1-211ENST00000449508 CNTNAP3BQ96NU0 1288 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 ACOX2Q99424 681 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 EDEM2Q9BV94 578 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 CNTNAP3Q9BZ76 1288 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 LRRC4Q9HBW1 653 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 METTL14Q9HCE5 456 aaKnown RBP14.38□□□□□ -0.11
TOM1-211ENST00000449508 MARCH2Q9P0N8 246 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 HESX1Q9UBX0 185 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 MBD1Q9UIS9 605 aaPredicted RBP14.38□□□□□ -0.11
TOM1-211ENST00000449508 TSPAN16Q9UKR8 245 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 STRIP2Q9ULQ0 834 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 ACACBO00763 2458 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 PI4KAP42356 2102 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 LAMA1P25391 3075 aa14.38□□□□□ -0.11
TOM1-211ENST00000449508 PLXND1Q9Y4D7 1925 aa14.37□□□□□ -0.11
TOM1-211ENST00000449508 SLC12A8A0AV02 714 aa14.37□□□□□ -0.11
TOM1-211ENST00000449508 C4orf47A7E2U8 309 aa14.37□□□□□ -0.11
TOM1-211ENST00000449508 PATE3B3GLJ2 98 aa14.37□□□□□ -0.11
TOM1-211ENST00000449508 TULP2O00295 520 aa14.37□□□□□ -0.11
TOM1-211ENST00000449508 VDRP11473 427 aa14.37□□□□□ -0.11
TOM1-211ENST00000449508 GABRG2P18507 467 aa14.37□□□□□ -0.11
TOM1-211ENST00000449508 CORO1AP31146 461 aaKnown RBP14.37□□□□□ -0.11
TOM1-211ENST00000449508 FMO5P49326 533 aa14.37□□□□□ -0.11
TOM1-211ENST00000449508 BCAT1P54687 386 aa14.37□□□□□ -0.11
TOM1-211ENST00000449508 CCDC40Q4G0X9 1142 aa14.37□□□□□ -0.11
TOM1-211ENST00000449508 PM20D1Q6GTS8 502 aa14.37□□□□□ -0.11
TOM1-211ENST00000449508 ARMCX6Q7L4S7 300 aa14.37□□□□□ -0.11
TOM1-211ENST00000449508 DENND1CQ8IV53 801 aa14.37□□□□□ -0.11
TOM1-211ENST00000449508 UBA3Q8TBC4 463 aa14.37□□□□□ -0.11
TOM1-211ENST00000449508 NDRG1Q92597 394 aaKnown RBP14.37□□□□□ -0.11
TOM1-211ENST00000449508 LSM14BQ9BX40 385 aaKnown RBP14.37□□□□□ -0.11
TOM1-211ENST00000449508 ULBP1Q9BZM6 244 aa14.37□□□□□ -0.11
TOM1-211ENST00000449508 FBXO10Q9UK96 956 aa14.37□□□□□ -0.11
TOM1-211ENST00000449508 AGO1Q9UL18 857 aaKnown RBP14.37□□□□□ -0.11
TOM1-211ENST00000449508 CHD8Q9HCK8 2581 aa14.36□□□□□ -0.11
TOM1-211ENST00000449508 A0A1W2PQF6 199 aa14.36□□□□□ -0.11
TOM1-211ENST00000449508 LNP1A1A4G5 178 aa14.36□□□□□ -0.11
TOM1-211ENST00000449508 XPO1O14980 1071 aaKnown RBP14.36□□□□□ -0.11
TOM1-211ENST00000449508 CD44P16070 742 aaKnown RBP14.36□□□□□ -0.11
TOM1-211ENST00000449508 TBXAS1P24557 533 aaPredicted RBP14.36□□□□□ -0.11
TOM1-211ENST00000449508 PPP1R2P41236 205 aa14.36□□□□□ -0.11
TOM1-211ENST00000449508 PTGER3P43115 390 aa14.36□□□□□ -0.11
TOM1-211ENST00000449508 IRX4P78413 519 aa14.36□□□□□ -0.11
TOM1-211ENST00000449508 BST2Q10589 180 aaKnown RBP14.36□□□□□ -0.11
TOM1-211ENST00000449508 SPDYCQ5MJ68 293 aa14.36□□□□□ -0.11
TOM1-211ENST00000449508 KLHL10Q6JEL2 608 aa14.36□□□□□ -0.11
TOM1-211ENST00000449508 ELOA2Q8IYF1 753 aaPredicted RBP14.36□□□□□ -0.11
TOM1-211ENST00000449508 IPO4Q8TEX9 1081 aaKnown RBP14.36□□□□□ -0.11
TOM1-211ENST00000449508 CEP63Q96MT8 703 aa14.36□□□□□ -0.11
TOM1-211ENST00000449508 IPO9Q96P70 1041 aaKnown RBP14.36□□□□□ -0.11
TOM1-211ENST00000449508 CACNA2D2Q9NY47 1150 aa14.36□□□□□ -0.11
TOM1-211ENST00000449508 CALCOCO1Q9P1Z2 691 aa14.36□□□□□ -0.11
TOM1-211ENST00000449508 MAN1B1Q9UKM7 699 aa14.36□□□□□ -0.11
TOM1-211ENST00000449508 KIAA1257Q9ULG3 409 aa14.36□□□□□ -0.11
TOM1-211ENST00000449508 WASH3PC4AMC7 463 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 AP5Z1O43299 807 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 KCNK5O95279 499 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 CYBBP04839 570 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 RPL6Q02878 288 aaKnown RBP14.35□□□□□ -0.11
TOM1-211ENST00000449508 ADIGQ0VDE8 80 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 CETN1Q12798 172 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 N4BP2L1Q5TBK1 243 aaPredicted RBP14.35□□□□□ -0.11
TOM1-211ENST00000449508 DAB2IPQ5VWQ8 1189 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 FYB2Q5VWT5 728 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 LYSMD4Q5XG99 296 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 KIAA1211LQ6NV74 962 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 TMEM270Q6UE05 265 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 SYT12Q8IV01 421 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 DEFB119Q8N690 84 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 RNF139Q8WU17 664 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 P2RY11Q96G91 374 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 NT5C1BQ96P26 610 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 GABRG3Q99928 467 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 TMEM9BQ9NQ34 198 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 OLA1Q9NTK5 396 aaKnown RBP14.35□□□□□ -0.11
TOM1-211ENST00000449508 TMEM74BQ9NUR3 256 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 SLC27A6Q9Y2P4 619 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 PCDHB4Q9Y5E5 795 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 RAD54BQ9Y620 910 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 TNRC6BQ9UPQ9 1833 aaKnown RBP14.35□□□□□ -0.11
TOM1-211ENST00000449508 EPG5Q9HCE0 2579 aa14.35□□□□□ -0.11
TOM1-211ENST00000449508 PPP1R3GB7ZBB8 358 aa14.34□□□□□ -0.11
TOM1-211ENST00000449508 O00370 1275 aa14.34□□□□□ -0.11
TOM1-211ENST00000449508 GFRA2O00451 464 aa14.34□□□□□ -0.11
TOM1-211ENST00000449508 ZNF217O75362 1048 aa14.34□□□□□ -0.11
TOM1-211ENST00000449508 PENKP01210 267 aaPredicted RBP14.34□□□□□ -0.11
TOM1-211ENST00000449508 LCP1P13796 627 aa14.34□□□□□ -0.11
TOM1-211ENST00000449508 NDUFV2P19404 249 aa14.34□□□□□ -0.11
TOM1-211ENST00000449508 TRIM61Q5EBN2 209 aa14.34□□□□□ -0.11
TOM1-211ENST00000449508 BSPRYQ5W0U4 402 aa14.34□□□□□ -0.11
TOM1-211ENST00000449508 SLC36A4Q6YBV0 504 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms