RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-222	ENST00000449504	R3HCC1	Q9Y3T6	440 aa	Known RBP	7.61	□□□□□ -1.19
HDLBP-222	ENST00000449504	PIEZO2	Q9H5I5	2752 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	MYO18A	Q92614	2054 aa	Known RBP	7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504		K7ENP7	123 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	CLDN5	O00501	218 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	VILL	O15195	856 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	TSPAN3	O60637	253 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	JAK2	O60674	1132 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	USP12	O75317	370 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	FAM13A	O94988	1023 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	IL18RAP	O95256	599 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	PRKCH	P24723	683 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	ZNF132	P52740	706 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	SLC12A3	P55017	1021 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	WNT7B	P56706	349 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	RACK1	P63244	317 aa	Known RBP	7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	RBP5	P82980	135 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	ARID5A	Q03989	594 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	ORC2	Q13416	577 aa	Predicted RBP	7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	ILK	Q13418	452 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	GNL2	Q13823	731 aa	Known RBP	7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	ZNF234	Q14588	700 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	GEN1	Q17RS7	908 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	ZSCAN23	Q3MJ62	389 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	ARSH	Q5FYA8	562 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	SLFN12L	Q6IEE8	588 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	INO80C	Q6PI98	192 aa	Predicted RBP	7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	CRELD2	Q6UXH1	353 aa	Predicted RBP	7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	SERPINA13P	Q6UXR4	307 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	HTR3D	Q70Z44	454 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	NT5DC4	Q86YG4	428 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	LRRC52	Q8N7C0	313 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	PDZD8	Q8NEN9	1154 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	MYCBPAP	Q8TBZ2	947 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	SORCS1	Q8WY21	1168 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	POMGNT1	Q8WZA1	660 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	SKA1	Q96BD8	255 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	MMS19	Q96T76	1030 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	REEP2	Q9BRK0	252 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	ARHGAP9	Q9BRR9	750 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	FAM213A	Q9BRX8	229 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	MMTAG2	Q9BU76	263 aa	Known RBP	7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	DPH1	Q9BZG8	443 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	TM6SF1	Q9BZW5	370 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	CIPC	Q9C0C6	399 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	ZNF518B	Q9C0D4	1074 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	AASDHPPT	Q9NRN7	309 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	ADAMTS1	Q9UHI8	967 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	LSM7	Q9UK45	103 aa	Known RBP	7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	SPTA1	P02549	2419 aa		7.6	□□□□□ -1.19
HDLBP-222	ENST00000449504	TCHH	Q07283	1943 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	ENO4	A6NNW6	628 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	SUV39H1	O43463	412 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	REC8	O95072	547 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	RTN3	O95197	1032 aa	Predicted RBP	7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	TBX18	O95935	607 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	AFP	P02771	609 aa	Known RBP	7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	WNT1	P04628	370 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	KRT18	P05783	430 aa	Known RBP	7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	CR2	P20023	1033 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	ACO1	P21399	889 aa	Known RBP	7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	EPHA8	P29322	1005 aa	Predicted RBP	7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	ARRB1	P49407	418 aa	Predicted RBP	7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	MFAP3	P55082	362 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	ERVPABLB-1	P60509	514 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	DAB2	P98082	770 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	E2F1	Q01094	437 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	ST3GAL1	Q11201	340 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	IL17A	Q16552	155 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	CACTIN-AS1	Q8N1I8	211 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	ZNF366	Q8N895	744 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	NSUN7	Q8NE18	718 aa	Known RBP	7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	OR6B3	Q8NGW1	331 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	OR2T3	Q8NH03	318 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	SCAMP5	Q8TAC9	235 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	GANC	Q8TET4	914 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	SNRNP27	Q8WVK2	155 aa	Known RBP	7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	KBTBD7	Q8WVZ9	684 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	RFFL	Q8WZ73	363 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	SAAL1	Q96ER3	474 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	HPDL	Q96IR7	371 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	CDK5RAP3	Q96JB5	506 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	KCNK16	Q96T55	309 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	OSBPL2	Q9H1P3	480 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	SNX25	Q9H3E2	840 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	GDF3	Q9NR23	364 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	THSD1	Q9NS62	852 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	TMEM30A	Q9NV96	361 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	ELOVL2	Q9NXB9	296 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	MARK1	Q9P0L2	795 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	NOL7	Q9UMY1	257 aa	Known RBP	7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	TMEM131	Q92545	1883 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	COL6A6	A6NMZ7	2263 aa		7.59	□□□□□ -1.19
HDLBP-222	ENST00000449504	GOLGA8IP	A6NC78	632 aa		7.58	□□□□□ -1.2
HDLBP-222	ENST00000449504	GOLGA8J	A6NMD2	632 aa		7.58	□□□□□ -1.2
HDLBP-222	ENST00000449504	NPC1	O15118	1278 aa		7.58	□□□□□ -1.2
HDLBP-222	ENST00000449504	GREM1	O60565	184 aa		7.58	□□□□□ -1.2
HDLBP-222	ENST00000449504	TLR5	O60602	858 aa		7.58	□□□□□ -1.2
HDLBP-222	ENST00000449504	SDC3	O75056	442 aa		7.58	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms