RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 LIMA1Q9UHB6 759 aaKnown RBP15.28■□□□□ 0.04
USP39-206ENST00000448971 LGALS16A8MUM7 142 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 HAX1O00165 279 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 SLC9A3R1O14745 358 aaPredicted RBP15.27■□□□□ 0.04
USP39-206ENST00000448971 UCHL3P15374 230 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 ZNF18P17022 549 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 LIMK1P53667 647 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 PTK2Q05397 1052 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 DRAP1Q14919 205 aaPredicted RBP15.27■□□□□ 0.04
USP39-206ENST00000448971 SKOR2Q2VWA4 1001 aaPredicted RBP15.27■□□□□ 0.04
USP39-206ENST00000448971 EML3Q32P44 896 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 KLHDC7AQ5VTJ3 777 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 BTBD8Q5XKL5 378 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 PKN3Q6P5Z2 889 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 SCD5Q86SK9 330 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 MIB1Q86YT6 1006 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 KCTD13Q8WZ19 329 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 GOLGA1Q92805 767 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 CHFRQ96EP1 664 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 ZFRQ96KR1 1074 aaKnown RBP15.27■□□□□ 0.04
USP39-206ENST00000448971 ECT2Q9H8V3 914 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 CNGB3Q9NQW8 809 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 RXFP3Q9NSD7 469 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 FAM207AQ9NSI2 230 aaPredicted RBP15.27■□□□□ 0.04
USP39-206ENST00000448971 CLIC5Q9NZA1 410 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 DNMT3LQ9UJW3 386 aa15.27■□□□□ 0.04
USP39-206ENST00000448971 LSM7Q9UK45 103 aaKnown RBP15.27■□□□□ 0.04
USP39-206ENST00000448971 CCDC163A0A0D9SF12 145 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 AXIN1O15169 862 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 TBX18O95935 607 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 ZNF806P0C7X5 589 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 ATP1A3P13637 1013 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 KLK7P49862 253 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 AMPD2Q01433 879 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 UBXN1Q04323 297 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 EFEMP1Q12805 493 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 NR1H3Q13133 447 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 SF3A2Q15428 464 aaKnown RBP15.26■□□□□ 0.03
USP39-206ENST00000448971 SYCP1Q15431 976 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 MEA1Q16626 185 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 PMF1Q6P1K2 205 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 DENND1BQ6P3S1 775 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 CEP68Q76N32 757 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 PASD1Q8IV76 773 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 DHX40Q8IX18 779 aaKnown RBP15.26■□□□□ 0.03
USP39-206ENST00000448971 SLC35F5Q8WV83 523 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 ZNF606Q8WXB4 792 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 DDX1Q92499 740 aaKnown RBP15.26■□□□□ 0.03
USP39-206ENST00000448971 LOXL4Q96JB6 756 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 FUCA2Q9BTY2 467 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 MIS12Q9H081 205 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 ARRDC1-AS1Q9H2J1 176 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 PDCL3Q9H2J4 239 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 STRIP2Q9ULQ0 834 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 CEP83Q9Y592 693 aa15.26■□□□□ 0.03
USP39-206ENST00000448971 EML5Q05BV3 1969 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 E2F8A0AVK6 867 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 OTOL1A6NHN0 477 aaPredicted RBP15.25■□□□□ 0.03
USP39-206ENST00000448971 F8VZ95 297 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 PMLP29590 882 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 PXNP49023 591 aaPredicted RBP15.25■□□□□ 0.03
USP39-206ENST00000448971 DAOAP59103 153 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 TPM4P67936 248 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 ZSCAN23Q3MJ62 389 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 TMEM196Q5HYL7 178 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 N4BP2L1Q5TBK1 243 aaPredicted RBP15.25■□□□□ 0.03
USP39-206ENST00000448971 PM20D1Q6GTS8 502 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 KLHDC10Q6PID8 442 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 RNF139Q8WU17 664 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 GAB3Q8WWW8 586 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 NDRG1Q92597 394 aaKnown RBP15.25■□□□□ 0.03
USP39-206ENST00000448971 EXOC4Q96A65 974 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 HSFY1Q96LI6 401 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 SPAG5Q96R06 1193 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 GANQ9H2C0 597 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 HSD3B7Q9H2F3 369 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 PLCB1Q9NQ66 1216 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 OLA1Q9NTK5 396 aaKnown RBP15.25■□□□□ 0.03
USP39-206ENST00000448971 TBC1D14Q9P2M4 693 aa15.25■□□□□ 0.03
USP39-206ENST00000448971 YJEFN3A6XGL0 299 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 E7ENQ6 273 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 FOXN3O00409 490 aaPredicted RBP15.24■□□□□ 0.03
USP39-206ENST00000448971 TRDMT1O14717 391 aaKnown RBP15.24■□□□□ 0.03
USP39-206ENST00000448971 SART1O43290 800 aaKnown RBP15.24■□□□□ 0.03
USP39-206ENST00000448971 FBXO21O94952 628 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 ADH1CP00326 375 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 CYP17A1P05093 508 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 HMBSP08397 361 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 GJA4P35212 333 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 KRT9P35527 623 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 GPD2P43304 727 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 ACADSBP45954 432 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 BPIFB4P59827 614 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 POLR2FP61218 127 aaKnown RBP15.24■□□□□ 0.03
USP39-206ENST00000448971 PDCLQ13371 301 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 CCDC6Q16204 474 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 PLA2G2CQ5R387 149 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 SMYD5Q6GMV2 418 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 FSTL4Q6MZW2 842 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 CACNA2D4Q7Z3S7 1137 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms