RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	PRPF31	Q8WWY3	499 aa	Known RBP	4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	CPA5	Q8WXQ8	436 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	P3H4	Q92791	437 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	ZBTB9	Q96C00	473 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	TLCD1	Q96CP7	247 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	C18orf8	Q96DM3	657 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	CYFIP2	Q96F07	1278 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	ANKRD36BP1	Q96IX9	119 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	C20orf173	Q96LM9	149 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	SCLT1	Q96NL6	688 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	SERPINB12	Q96P63	405 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	MMP19	Q99542	508 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	GPR20	Q99678	358 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	ACO2	Q99798	780 aa	Known RBP	4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	TCHP	Q9BT92	498 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	PI4K2A	Q9BTU6	479 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	TARS2	Q9BW92	718 aa	Known RBP	4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	OSBPL8	Q9BZF1	889 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	DCLK3	Q9C098	648 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	MIS12	Q9H081	205 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	NSRP1	Q9H0G5	558 aa	Known RBP	4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	NEUROG2	Q9H2A3	272 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	ADAMTS10	Q9H324	1103 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	MROH8	Q9H579	483 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	ERVK-5	Q9HDB9	667 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	PRMT7	Q9NVM4	692 aa	Predicted RBP	4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	DDX56	Q9NY93	547 aa	Known RBP	4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	GRHL1	Q9NZI5	618 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	BTBD7	Q9P203	1132 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	WDR35	Q9P2L0	1181 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	FAM8A1	Q9UBU6	413 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	ASIC3	Q9UHC3	531 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	NR2E1	Q9Y466	385 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995	RLF	Q13129	1914 aa		4.27	□□□□□ -1.73
PTPN12-208	ENST00000447995		A0A0G2JMZ2	1700 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	MROH7	Q68CQ1	1323 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	COL11A1	P12107	1806 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	SI	P14410	1827 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	IGKV6-21	A0A0C4DH24	114 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	TMEM191C	A6NGB0	347 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	UNCX	A6NJT0	531 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995		E7EVH7	732 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	GFRA2	O00451	464 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	ACKR2	O00590	384 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	TLR3	O15455	904 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	MAGEB2	O15479	319 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	RIPK2	O43353	540 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	TRAPPC3	O43617	180 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	SORBS3	O60504	671 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	B4GALT4	O60513	344 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	MSC	O60682	206 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	TJP3	O95049	919 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	KRT7	P08729	469 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	CTSH	P09668	335 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	SRGAP2C	P0DJJ0	459 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	MCF2	P10911	925 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	DES	P17661	470 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	MMP8	P22894	467 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	TMOD1	P28289	359 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	ATIC	P31939	592 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	CDH5	P33151	784 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	PTPN7	P35236	360 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	FLT3	P36888	993 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	ADCY8	P40145	1251 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	ZNF132	P52740	706 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	TFAM	Q00059	246 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	GUCY1A3	Q02108	690 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	SLC20A2	Q08357	652 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	MAMLD1	Q13495	774 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	PRKG1	Q13976	671 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	PIGH	Q14442	188 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	SIX1	Q15475	284 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	ZNF699	Q32M78	642 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	TIGD5	Q53EQ6	642 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	TREML2	Q5T2D2	321 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	ZFYVE27	Q5T4F4	411 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	ATF7IP2	Q5U623	682 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	DCUN1D2	Q6PH85	259 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	MMS22L	Q6ZRQ5	1243 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	GSTA5	Q7RTV2	222 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	POLN	Q7Z5Q5	900 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	TAX1BP1	Q86VP1	789 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	ERICH1	Q86X53	443 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	RIBC1	Q8N443	379 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	OTUD6B	Q8N6M0	293 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	UBR7	Q8N806	425 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	RNF149	Q8NC42	400 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	OR5B17	Q8NGF7	314 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	OR2W6P	Q8NHA6	318 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	MYCBPAP	Q8TBZ2	947 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	IPO4	Q8TEX9	1081 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	ZNF526	Q8TF50	670 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	ZNF473	Q8WTR7	871 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	ZNF606	Q8WXB4	792 aa		4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	ZBTB45	Q96K62	511 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-208	ENST00000447995	CCDC114	Q96M63	670 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms