RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 PIDD1Q9HB75 910 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 PIGVQ9NUD9 493 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.34■□□□□ 0.85
SGCE-207ENST00000447873 DOCK6Q96HP0 2047 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 DDX3YO15523 660 aaKnown RBP20.34■□□□□ 0.85
SGCE-207ENST00000447873 KRT7P08729 469 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 ATP5C1P36542 298 aaKnown RBP20.34■□□□□ 0.85
SGCE-207ENST00000447873 MARCKSL1P49006 195 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 ZFYVE27Q5T4F4 411 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 PAPD7Q5XG87 772 aaKnown RBP20.34■□□□□ 0.85
SGCE-207ENST00000447873 TMEM184AQ6ZMB5 413 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 GAREM2Q75VX8 874 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 PDZD4Q76G19 769 aaPredicted RBP20.34■□□□□ 0.85
SGCE-207ENST00000447873 FAM131BQ86XD5 332 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 C12orf76Q8N812 135 aaPredicted RBP20.34■□□□□ 0.85
SGCE-207ENST00000447873 LEMD2Q8NC56 503 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 SMG7Q92540 1137 aaKnown RBP20.34■□□□□ 0.85
SGCE-207ENST00000447873 MRPS31Q92665 395 aaKnown RBP20.34■□□□□ 0.85
SGCE-207ENST00000447873 LRCH3Q96II8 777 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 ATXN3LQ9H3M9 355 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 MARCH2Q9P0N8 246 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 DNMT3BQ9UBC3 853 aaKnown RBP20.34■□□□□ 0.85
SGCE-207ENST00000447873 RASAL2Q9UJF2 1139 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 SNX12Q9UMY4 172 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 MTCH2Q9Y6C9 303 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 KCNK3O14649 394 aa20.33■□□□□ 0.84
SGCE-207ENST00000447873 IRAK2O43187 625 aa20.33■□□□□ 0.84
SGCE-207ENST00000447873 GLP2RO95838 553 aa20.33■□□□□ 0.84
SGCE-207ENST00000447873 IGLV3-25P01717 112 aa20.33■□□□□ 0.84
SGCE-207ENST00000447873 IGFBP4P22692 258 aa20.33■□□□□ 0.84
SGCE-207ENST00000447873 IL1R2P27930 398 aa20.33■□□□□ 0.84
SGCE-207ENST00000447873 EPHA5P54756 1037 aa20.33■□□□□ 0.84
SGCE-207ENST00000447873 TMC5Q6UXY8 1006 aa20.33■□□□□ 0.84
SGCE-207ENST00000447873 POLNQ7Z5Q5 900 aa20.33■□□□□ 0.84
SGCE-207ENST00000447873 MIB1Q86YT6 1006 aa20.33■□□□□ 0.84
SGCE-207ENST00000447873 RNF34Q969K3 372 aa20.33■□□□□ 0.84
SGCE-207ENST00000447873 ZNF707Q96C28 371 aaPredicted RBP20.33■□□□□ 0.84
SGCE-207ENST00000447873 FAM161BQ96MY7 647 aa20.33■□□□□ 0.84
SGCE-207ENST00000447873 PEBP4Q96S96 227 aa20.33■□□□□ 0.84
SGCE-207ENST00000447873 TRPC7Q9HCX4 862 aa20.33■□□□□ 0.84
SGCE-207ENST00000447873 DNMT3LQ9UJW3 386 aa20.33■□□□□ 0.84
SGCE-207ENST00000447873 SAR1BQ9Y6B6 198 aa20.33■□□□□ 0.84
SGCE-207ENST00000447873 A0A1W2PRU2 124 aa20.32■□□□□ 0.84
SGCE-207ENST00000447873 MDM4O15151 490 aa20.32■□□□□ 0.84
SGCE-207ENST00000447873 LINC01565O15544 149 aa20.32■□□□□ 0.84
SGCE-207ENST00000447873 MSI1O43347 362 aaKnown RBP20.32■□□□□ 0.84
SGCE-207ENST00000447873 RHOP08100 348 aa20.32■□□□□ 0.84
SGCE-207ENST00000447873 POU3F3P20264 500 aaPredicted RBP20.32■□□□□ 0.84
SGCE-207ENST00000447873 CXCR5P32302 372 aa20.32■□□□□ 0.84
SGCE-207ENST00000447873 PEX5P50542 639 aa20.32■□□□□ 0.84
SGCE-207ENST00000447873 RWDD2BP57060 319 aa20.32■□□□□ 0.84
SGCE-207ENST00000447873 SMTNL2Q2TAL5 461 aa20.32■□□□□ 0.84
SGCE-207ENST00000447873 BOLA3Q53S33 107 aa20.32■□□□□ 0.84
SGCE-207ENST00000447873 ODF2Q5BJF6 829 aa20.32■□□□□ 0.84
SGCE-207ENST00000447873 TXNRD3NBQ6F5E7 133 aa20.32■□□□□ 0.84
SGCE-207ENST00000447873 KLHDC10Q6PID8 442 aa20.32■□□□□ 0.84
SGCE-207ENST00000447873 GRASPQ7Z6J2 395 aaPredicted RBP20.32■□□□□ 0.84
SGCE-207ENST00000447873 CMASQ8NFW8 434 aaPredicted RBP20.32■□□□□ 0.84
SGCE-207ENST00000447873 ALG3Q92685 438 aa20.32■□□□□ 0.84
SGCE-207ENST00000447873 OSBPL9Q96SU4 736 aa20.32■□□□□ 0.84
SGCE-207ENST00000447873 WDCPQ9H6R7 721 aa20.32■□□□□ 0.84
SGCE-207ENST00000447873 WDR6Q9NNW5 1121 aaKnown RBP20.32■□□□□ 0.84
SGCE-207ENST00000447873 TMEM51Q9NW97 253 aa20.32■□□□□ 0.84
SGCE-207ENST00000447873 C2orf78A6NCI8 922 aa20.31■□□□□ 0.84
SGCE-207ENST00000447873 COCHO43405 550 aa20.31■□□□□ 0.84
SGCE-207ENST00000447873 URI1O94763 535 aaPredicted RBP20.31■□□□□ 0.84
SGCE-207ENST00000447873 OAS1P00973 400 aaKnown RBP20.31■□□□□ 0.84
SGCE-207ENST00000447873 PRLRP16471 622 aa20.31■□□□□ 0.84
SGCE-207ENST00000447873 TCP1P17987 556 aaKnown RBP20.31■□□□□ 0.84
SGCE-207ENST00000447873 CXCR3P49682 368 aa20.31■□□□□ 0.84
SGCE-207ENST00000447873 CYP4F8P98187 520 aa20.31■□□□□ 0.84
SGCE-207ENST00000447873 ADGRE1Q14246 886 aa20.31■□□□□ 0.84
SGCE-207ENST00000447873 ATP13A4Q4VNC1 1196 aa20.31■□□□□ 0.84
SGCE-207ENST00000447873 KCNT1Q5JUK3 1230 aa20.31■□□□□ 0.84
SGCE-207ENST00000447873 TXNDC8Q6A555 127 aa20.31■□□□□ 0.84
SGCE-207ENST00000447873 GAS2L1Q99501 681 aaPredicted RBP20.31■□□□□ 0.84
SGCE-207ENST00000447873 RRAGDQ9NQL2 400 aaPredicted RBP20.31■□□□□ 0.84
SGCE-207ENST00000447873 DDX56Q9NY93 547 aaKnown RBP20.31■□□□□ 0.84
SGCE-207ENST00000447873 TLR6Q9Y2C9 796 aa20.31■□□□□ 0.84
SGCE-207ENST00000447873 SLC12A8A0AV02 714 aa20.3■□□□□ 0.84
SGCE-207ENST00000447873 PAPLNO95428 1278 aa20.3■□□□□ 0.84
SGCE-207ENST00000447873 RARAP10276 462 aa20.3■□□□□ 0.84
SGCE-207ENST00000447873 GJA1P17302 382 aa20.3■□□□□ 0.84
SGCE-207ENST00000447873 CCR2P41597 374 aa20.3■□□□□ 0.84
SGCE-207ENST00000447873 TBX4P57082 545 aa20.3■□□□□ 0.84
SGCE-207ENST00000447873 NNTQ13423 1086 aa20.3■□□□□ 0.84
SGCE-207ENST00000447873 ADAM15Q13444 863 aa20.3■□□□□ 0.84
SGCE-207ENST00000447873 EIF4EBP2Q13542 120 aaPredicted RBP20.3■□□□□ 0.84
SGCE-207ENST00000447873 ARL13BQ3SXY8 428 aa20.3■□□□□ 0.84
SGCE-207ENST00000447873 RARS2Q5T160 578 aaKnown RBP20.3■□□□□ 0.84
SGCE-207ENST00000447873 ERMARDQ5T6L9 678 aa20.3■□□□□ 0.84
SGCE-207ENST00000447873 ANKRD54Q6NXT1 300 aa20.3■□□□□ 0.84
SGCE-207ENST00000447873 KATNAL2Q8IYT4 538 aa20.3■□□□□ 0.84
SGCE-207ENST00000447873 CCDC185Q8N715 623 aa20.3■□□□□ 0.84
SGCE-207ENST00000447873 HSPH1Q92598 858 aa20.3■□□□□ 0.84
SGCE-207ENST00000447873 ACSF2Q96CM8 615 aaPredicted RBP20.3■□□□□ 0.84
SGCE-207ENST00000447873 RNF38Q9H0F5 515 aa20.3■□□□□ 0.84
SGCE-207ENST00000447873 KLHL11Q9NVR0 708 aa20.3■□□□□ 0.84
SGCE-207ENST00000447873 NOTCH4Q99466 2003 aa20.3■□□□□ 0.84
SGCE-207ENST00000447873 ZNF197O14709 1029 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms