RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 UCNP55089 124 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 WNT7BP56706 349 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 SRSF1Q07955 248 aaKnown RBP eCLIP7.5□□□□□ -1.21
LRRC28-203ENST00000447360 KCNH2Q12809 1159 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 SCARA3Q6AZY7 606 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 HS2ST1Q7LGA3 356 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 ZNF720Q7Z2F6 126 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 SPACA3Q8IXA5 215 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 FBXO32Q969P5 355 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 HPDLQ96IR7 371 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 HNRNPABQ99729 332 aaKnown RBP7.5□□□□□ -1.21
LRRC28-203ENST00000447360 FAM213AQ9BRX8 229 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 CCSER2Q9H7U1 834 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 TM9SF3Q9HD45 589 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.5□□□□□ -1.21
LRRC28-203ENST00000447360 RBAKQ9NYW8 714 aaPredicted RBP7.5□□□□□ -1.21
LRRC28-203ENST00000447360 IL37Q9NZH6 218 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 THAP10Q9P2Z0 257 aaPredicted RBP7.5□□□□□ -1.21
LRRC28-203ENST00000447360 CHORDC1Q9UHD1 332 aaPredicted RBP7.5□□□□□ -1.21
LRRC28-203ENST00000447360 FBXO10Q9UK96 956 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 SLC27A6Q9Y2P4 619 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.5□□□□□ -1.21
LRRC28-203ENST00000447360 CEP192Q8TEP8 1941 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 FAM92AA1XBS5 289 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 H0Y8X5 98 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 BRINP1O60477 761 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 TACC1O75410 805 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 NTRK1P04629 796 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 KRT18P05783 430 aaKnown RBP7.49□□□□□ -1.21
LRRC28-203ENST00000447360 TMEM191BP0C7N4 346 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 ZDHHC11BP0C7U3 371 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 PTPN1P18031 435 aaKnown RBP7.49□□□□□ -1.21
LRRC28-203ENST00000447360 GARTP22102 1010 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 GJB2P29033 226 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 GNL1P36915 607 aaPredicted RBP7.49□□□□□ -1.21
LRRC28-203ENST00000447360 CTSKP43235 329 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 CSRP3P50461 194 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 COPAP53621 1224 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 CACNA2D1P54289 1103 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 TMPRSS3P57727 454 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 GOLGA8FQ08AF8 430 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 GOLGA8DPQ0D2H9 430 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 CCDC173Q0VFZ6 552 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 IFRD2Q12894 506 aaPredicted RBP7.49□□□□□ -1.21
LRRC28-203ENST00000447360 ILKQ13418 452 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 TBC1D25Q3MII6 688 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 MDH1BQ5I0G3 518 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 HES3Q5TGS1 186 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 BROXQ5VW32 411 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 ARL6IP4Q66PJ3 421 aaKnown RBP7.49□□□□□ -1.21
LRRC28-203ENST00000447360 FBXL19Q6PCT2 694 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 TPGS1Q6ZTW0 290 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 USP49Q70CQ1 688 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 ERICH1Q86X53 443 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 FMNL3Q8IVF7 1028 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 ZNF248Q8NDW4 579 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 UCMAQ8WVF2 138 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 SNX19Q92543 992 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 WBP2Q969T9 261 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 ANKRD36BP1Q96IX9 119 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 AK8Q96MA6 479 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 STRA6Q9BX79 667 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 MTMR12Q9C0I1 747 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 NACA2Q9H009 215 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 SNX25Q9H3E2 840 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 ZHX3Q9H4I2 956 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 UPF2Q9HAU5 1272 aaKnown RBP7.49□□□□□ -1.21
LRRC28-203ENST00000447360 TMEM30AQ9NV96 361 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 COMMD8Q9NX08 183 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 EXOC7Q9UPT5 735 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 SLCO1B1Q9Y6L6 691 aa7.49□□□□□ -1.21
LRRC28-203ENST00000447360 MYOFQ9NZM1 2061 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 A0A1B0GTQ1 180 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 VWA3AA6NCI4 1184 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 KCNK3O14649 394 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 TLR5O60602 858 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 TSPAN3O60637 253 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 LDOC1O95751 146 aaPredicted RBP7.48□□□□□ -1.21
LRRC28-203ENST00000447360 IRF1P10914 325 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 ANK1P16157 1881 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 CD27P26842 260 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 ACADVLP49748 655 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 CDH8P55286 799 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 CUL4AQ13619 759 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 DHX8Q14562 1220 aaKnown RBP7.48□□□□□ -1.21
LRRC28-203ENST00000447360 EIF4HQ15056 248 aaKnown RBP7.48□□□□□ -1.21
LRRC28-203ENST00000447360 DUOXA2Q1HG44 320 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 ADAT2Q7Z6V5 191 aaKnown RBP7.48□□□□□ -1.21
LRRC28-203ENST00000447360 SCAMP5Q8TAC9 235 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 SNRNP27Q8WVK2 155 aaKnown RBP7.48□□□□□ -1.21
LRRC28-203ENST00000447360 RFFLQ8WZ73 363 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 TSC1Q92574 1164 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 SKA1Q96BD8 255 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 BIRC7Q96CA5 298 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 SAAL1Q96ER3 474 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 MED8Q96G25 268 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 CALML4Q96GE6 196 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 CNDP2Q96KP4 475 aaKnown RBP7.48□□□□□ -1.21
LRRC28-203ENST00000447360 MMS19Q96T76 1030 aa7.48□□□□□ -1.21
LRRC28-203ENST00000447360 LGMNQ99538 433 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms