RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 STON1Q9Y6Q2 735 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 SPENQ96T58 3664 aaKnown RBP6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 KCNK3O14649 394 aa6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 HGSO14964 777 aaPredicted RBP6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 KCNE1P15382 129 aa6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 ARF4P18085 180 aaPredicted RBP6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 SPAM1P38567 509 aa6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 ADAM8P78325 824 aa6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 YWHAHQ04917 246 aaPredicted RBP6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 MBTD1Q05BQ5 628 aa6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 ZFP36L1Q07352 338 aaKnown RBP6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 SHEQ5VZ18 495 aa6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 TMPRSS6Q8IU80 811 aa6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 SLC25A45Q8N413 288 aa6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 MCUQ8NE86 351 aa6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 ZNF577Q9BSK1 485 aa6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 ADAM21Q9UKJ8 722 aa6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 LOXL2Q9Y4K0 774 aa6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 ARID1BQ8NFD5 2236 aaPredicted RBP6.84□□□□□ -1.31
BRAFP1-201ENST00000445336 LRRC72A6NJI9 287 aa6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 PODXLO00592 558 aa6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 CEACAM4O75871 244 aa6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 DGKAP23743 735 aa6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 CIITAP33076 1130 aa6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 STAT1P42224 750 aa6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 MFAP1P55081 439 aaKnown RBP6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 ARPP19P56211 112 aa6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 DUSP4Q13115 394 aa6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 JMJD6Q6NYC1 403 aaPredicted RBP6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 EFL1Q7Z2Z2 1120 aaKnown RBP6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 HOMER1Q86YM7 354 aa6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 OR2T34Q8NGX1 318 aa6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 WBP2Q969T9 261 aa6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 COX4I2Q96KJ9 171 aa6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 SLC6A18Q96N87 628 aa6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 SMG9Q9H0W8 520 aaKnown RBP6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 TOPORSQ9NS56 1045 aaPredicted RBP6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 DDX43Q9NXZ2 648 aaKnown RBP6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 FBXO10Q9UK96 956 aa6.84□□□□□ -1.32
BRAFP1-201ENST00000445336 IGLV3-22A0A075B6J6 115 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 TULP3O75386 442 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 ACO1P21399 889 aaKnown RBP6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 AKAP5P24588 427 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 CLCNKBP51801 687 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 ZPBPQ9BS86 351 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 MINDY3Q9H8M7 445 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 IL1RAPL2Q9NP60 686 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 DSEQ9UL01 958 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 NCKAP1Q9Y2A7 1128 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 NEU2Q9Y3R4 380 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 C9orf172C9J069 976 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 ZNF213O14771 459 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 CYTH3O43739 400 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 PIAS2O75928 621 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 PNLIPP16233 465 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 MAN1A1P33908 653 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 KDSRQ06136 332 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 ARMCX5Q6P1M9 558 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 SPATS2Q86XZ4 545 aaKnown RBP6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 CRYGNQ8WXF5 182 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 UBAC1Q9BSL1 405 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 MTA3Q9BTC8 594 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 BOCQ9BWV1 1114 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 RIC8AQ9NPQ8 531 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 AGPAT4Q9NRZ5 378 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 BARHL2Q9NY43 387 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 TRPM5Q9NZQ8 1165 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 PCDHGB6Q9Y5F9 930 aa6.83□□□□□ -1.32
BRAFP1-201ENST00000445336 LRRTM2O43300 516 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 LATO43561 262 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 LY6G6DO95868 133 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 OAS2P29728 719 aaKnown RBP6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 TRA2AQ13595 282 aaKnown RBP eCLIP6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 DRAP1Q14919 205 aaPredicted RBP6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 SDR16C5Q8N3Y7 309 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 C3orf20Q8ND61 904 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 PRPF31Q8WWY3 499 aaKnown RBP6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 ZNF668Q96K58 619 aaPredicted RBP6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 CMKLR1Q99788 373 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 ANO3Q9BYT9 981 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 C2orf40Q9H1Z8 148 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 MAGEC2Q9UBF1 373 aaPredicted RBP6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 TLK1Q9UKI8 766 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 HES2Q9Y543 173 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 BAZ2BQ9UIF8 2168 aaKnown RBP6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 SDK2Q58EX2 2172 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 D6RAR5 112 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 LEFTY2O00292 366 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 TBX3O15119 743 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 RAD1O60671 282 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 CHGBP05060 677 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 LPOP22079 712 aaPredicted RBP6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 DNASE1P24855 282 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 BRCC3P46736 316 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 SEC23AQ15436 765 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 SLC35G1Q2M3R5 365 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 DEFB109BQ30KR1 87 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 HMBOX1Q6NT76 420 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 RHOT1Q8IXI2 618 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms