RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 GIPC2Q8TF65 315 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 HTR3CQ8WXA8 447 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 CCT6BQ92526 530 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 MYLPFQ96A32 169 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 CAPNS2Q96L46 248 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 ETNK1Q9HBU6 452 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 DMAP1Q9NPF5 467 aaPredicted RBP10.95□□□□□ -0.66
CALD1-210ENST00000443197 SLC27A5Q9Y2P5 690 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 CA12O43570 354 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 F2P00734 622 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 F9P00740 461 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 NOS2P35228 1153 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 PTGIRP43119 386 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 HADHBP55084 474 aaKnown RBP10.95□□□□□ -0.66
CALD1-210ENST00000443197 AUHQ13825 339 aaKnown RBP10.95□□□□□ -0.66
CALD1-210ENST00000443197 CTU1Q7Z7A3 348 aaKnown RBP10.95□□□□□ -0.66
CALD1-210ENST00000443197 ZNF467Q7Z7K2 595 aaPredicted RBP10.95□□□□□ -0.66
CALD1-210ENST00000443197 ZDHHC17Q8IUH5 632 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 CRLF3Q8IUI8 442 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 MREGQ8N565 214 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 WNT8BQ93098 351 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 HSFY1Q96LI6 401 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 TRPV6Q9H1D0 765 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 NRDE2Q9H7Z3 1164 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 SLC12A8A0AV02 714 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 RNF103O00237 685 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 SEPT4O43236 478 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 MTA2O94776 668 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 SNRPAP09012 282 aaKnown RBP10.95□□□□□ -0.66
CALD1-210ENST00000443197 ACAP1Q15027 740 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 DDR2Q16832 855 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 CCDC142Q17RM4 750 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 GDF6Q6KF10 455 aaPredicted RBP10.95□□□□□ -0.66
CALD1-210ENST00000443197 TTC30AQ86WT1 665 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 ZCCHC9Q8N567 271 aaKnown RBP10.95□□□□□ -0.66
CALD1-210ENST00000443197 GLIS1Q8NBF1 620 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 COLEC11Q9BWP8 271 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 SENP1Q9P0U3 644 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 OR12D3Q9UGF7 316 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.94□□□□□ -0.66
CALD1-210ENST00000443197 ARL5CA6NH57 179 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 FBXO21O94952 628 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 ABCG1P45844 678 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 RAB27AP51159 221 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 TRIM32Q13049 653 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 C15orf39Q6ZRI6 1047 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 POLNQ7Z5Q5 900 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 FAM228AQ86W67 206 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 SGSM3Q96HU1 749 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 TRIM62Q9BVG3 475 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 PCDH18Q9HCL0 1135 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 SMG5Q9UPR3 1016 aaKnown RBP10.94□□□□□ -0.66
CALD1-210ENST00000443197 IGKV6-21A0A0C4DH24 114 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 HSPA4LO95757 839 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 POLBP06746 335 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 BFSP2Q13515 415 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 VEPH1Q14D04 833 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 ATG16L1Q676U5 607 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 FAM35AQ86V20 835 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 RASAL3Q86YV0 1011 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 MYLK4Q86YV6 388 aaPredicted RBP10.94□□□□□ -0.66
CALD1-210ENST00000443197 STKLD1Q8NE28 680 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 TMEM40Q8WWA1 233 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 USP6NLQ92738 828 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 FAM136AQ96C01 138 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 TMEM169Q96HH4 297 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 PIWIL1Q96J94 861 aaKnown RBP10.94□□□□□ -0.66
CALD1-210ENST00000443197 DUSP16Q9BY84 665 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 RHOBTB2Q9BYZ6 727 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 PRDM12Q9H4Q4 367 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 SFMBT1Q9UHJ3 866 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 CIB2O75838 187 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 PYGBP11216 843 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 CA9Q16790 459 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 MAP7D1Q3KQU3 841 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 KBTBD12Q3ZCT8 623 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 FBXW10Q5XX13 1052 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 TRIM42Q8IWZ5 723 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 SEPT8Q92599 483 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 UNKQ9C0B0 810 aaKnown RBP10.94□□□□□ -0.66
CALD1-210ENST00000443197 CATSPERBQ9H7T0 1116 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 SARS2Q9NP81 518 aaKnown RBP10.94□□□□□ -0.66
CALD1-210ENST00000443197 SMPD4Q9NXE4 827 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 GRHL1Q9NZI5 618 aa10.94□□□□□ -0.66
CALD1-210ENST00000443197 USP15Q9Y4E8 981 aaPredicted RBP10.94□□□□□ -0.66
CALD1-210ENST00000443197 UBA6A0AVT1 1052 aaPredicted RBP10.93□□□□□ -0.66
CALD1-210ENST00000443197 MYADML2A6NDP7 307 aa10.93□□□□□ -0.66
CALD1-210ENST00000443197 MEIS3P2A8K0S8 358 aa10.93□□□□□ -0.66
CALD1-210ENST00000443197 MATKP42679 507 aa10.93□□□□□ -0.66
CALD1-210ENST00000443197 ARFIP2P53365 341 aa10.93□□□□□ -0.66
CALD1-210ENST00000443197 GDF10P55107 478 aa10.93□□□□□ -0.66
CALD1-210ENST00000443197 MRPS5P82675 430 aaKnown RBP10.93□□□□□ -0.66
CALD1-210ENST00000443197 TAF1BQ53T94 588 aaPredicted RBP10.93□□□□□ -0.66
CALD1-210ENST00000443197 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.93□□□□□ -0.66
CALD1-210ENST00000443197 SAPCD2Q86UD0 394 aa10.93□□□□□ -0.66
CALD1-210ENST00000443197 EIF1ADQ8N9N8 165 aaKnown RBP10.93□□□□□ -0.66
CALD1-210ENST00000443197 DEFB118Q96PH6 123 aa10.93□□□□□ -0.66
CALD1-210ENST00000443197 FAM129AQ9BZQ8 928 aa10.93□□□□□ -0.66
CALD1-210ENST00000443197 UBN1Q9NPG3 1134 aa10.93□□□□□ -0.66
CALD1-210ENST00000443197 VANGL2Q9ULK5 521 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms