RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 EEF1GP26641 437 aaKnown RBP9.2□□□□□ -0.94
USP6NL-203ENST00000443016 GBP1P32455 592 aa9.2□□□□□ -0.94
USP6NL-203ENST00000443016 GRIA2P42262 883 aa9.2□□□□□ -0.94
USP6NL-203ENST00000443016 FOXK2Q01167 660 aa9.2□□□□□ -0.94
USP6NL-203ENST00000443016 PUM1Q14671 1186 aaKnown RBP eCLIP9.2□□□□□ -0.94
USP6NL-203ENST00000443016 RSPO4Q2I0M5 234 aaPredicted RBP9.2□□□□□ -0.94
USP6NL-203ENST00000443016 SGO2Q562F6 1265 aa9.2□□□□□ -0.94
USP6NL-203ENST00000443016 PPP1R15BQ5SWA1 713 aa9.2□□□□□ -0.94
USP6NL-203ENST00000443016 ANO7Q6IWH7 933 aa9.2□□□□□ -0.94
USP6NL-203ENST00000443016 TPGS1Q6ZTW0 290 aa9.2□□□□□ -0.94
USP6NL-203ENST00000443016 ERMP1Q7Z2K6 904 aa9.2□□□□□ -0.94
USP6NL-203ENST00000443016 DGLUCYQ7Z3D6 616 aa9.2□□□□□ -0.94
USP6NL-203ENST00000443016 TMEM25Q86YD3 366 aa9.2□□□□□ -0.94
USP6NL-203ENST00000443016 PPM1KQ8N3J5 372 aa9.2□□□□□ -0.94
USP6NL-203ENST00000443016 FAM160A2Q8N612 972 aaPredicted RBP9.2□□□□□ -0.94
USP6NL-203ENST00000443016 USP33Q8TEY7 942 aa9.2□□□□□ -0.94
USP6NL-203ENST00000443016 GAB3Q8WWW8 586 aa9.2□□□□□ -0.94
USP6NL-203ENST00000443016 CDK5RAP1Q96SZ6 601 aaKnown RBP9.2□□□□□ -0.94
USP6NL-203ENST00000443016 SRRTQ9BXP5 876 aaKnown RBP9.2□□□□□ -0.94
USP6NL-203ENST00000443016 NMUR1Q9HB89 426 aa9.2□□□□□ -0.94
USP6NL-203ENST00000443016 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.2□□□□□ -0.94
USP6NL-203ENST00000443016 FANCLQ9NW38 375 aa9.2□□□□□ -0.94
USP6NL-203ENST00000443016 CDV3Q9UKY7 258 aaKnown RBP9.2□□□□□ -0.94
USP6NL-203ENST00000443016 COQ4Q9Y3A0 265 aa9.2□□□□□ -0.94
USP6NL-203ENST00000443016 PRR5-ARHGAP8B1AHC4 643 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 NEDD8-MDP1E9PL57 170 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 MDM4O15151 490 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 SDHBP21912 280 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 TIE1P35590 1138 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 PLA2G4AP47712 749 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 FMO5P49326 533 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 ARHGAP8P85298 464 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 NCAPHQ15003 741 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 CCDC186Q7Z3E2 898 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 PIGZQ86VD9 579 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 C12orf40Q86WS4 652 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 CREBRFQ8IUR6 639 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 ZC3H3Q8IXZ2 948 aaKnown RBP9.19□□□□□ -0.94
USP6NL-203ENST00000443016 ALLCQ8N6M5 410 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 ANKRD52Q8NB46 1076 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 BHMTQ93088 406 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 NT5C1BQ96P26 610 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 DUSP9Q99956 384 aaKnown RBP9.19□□□□□ -0.94
USP6NL-203ENST00000443016 BBS2Q9BXC9 721 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 SEMA4GQ9NTN9 838 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 OSER1Q9NX31 292 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 HELZP42694 1942 aaKnown RBP9.19□□□□□ -0.94
USP6NL-203ENST00000443016 CBFA2T2O43439 604 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 LRP3O75074 770 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 TULP3O75386 442 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 ALDH1A2O94788 518 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 SERPINC1P01008 464 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 TKTL1P51854 596 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 MRPS21P82921 87 aaKnown RBP9.19□□□□□ -0.94
USP6NL-203ENST00000443016 MESP2Q0VG99 397 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 EFEMP1Q12805 493 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 ELF2Q15723 593 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 CRY1Q16526 586 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 GOLGA7BQ2TAP0 167 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 GAB4Q2WGN9 574 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 PLEKHG6Q3KR16 790 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 USP39Q53GS9 565 aaKnown RBP9.19□□□□□ -0.94
USP6NL-203ENST00000443016 CDKAL1Q5VV42 579 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 KLHDC10Q6PID8 442 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 TMEM270Q6UE05 265 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 HTR3DQ70Z44 454 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 ARHGAP18Q8N392 663 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 TXNDC5Q8NBS9 432 aaKnown RBP9.19□□□□□ -0.94
USP6NL-203ENST00000443016 PRR7Q8TB68 274 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 CNOT6LQ96LI5 555 aaKnown RBP9.19□□□□□ -0.94
USP6NL-203ENST00000443016 XPO6Q96QU8 1125 aaKnown RBP9.19□□□□□ -0.94
USP6NL-203ENST00000443016 KLF16Q9BXK1 252 aaPredicted RBP9.19□□□□□ -0.94
USP6NL-203ENST00000443016 LRRC4Q9HBW1 653 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 CLIC5Q9NZA1 410 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 RASAL2Q9UJF2 1139 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 TSPAN16Q9UKR8 245 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 STRIP2Q9ULQ0 834 aa9.19□□□□□ -0.94
USP6NL-203ENST00000443016 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.19□□□□□ -0.94
USP6NL-203ENST00000443016 KCNJ18B7U540 433 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 KLF8O95600 359 aaPredicted RBP9.18□□□□□ -0.94
USP6NL-203ENST00000443016 HMBSP08397 361 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 MTIF2P46199 727 aaKnown RBP9.18□□□□□ -0.94
USP6NL-203ENST00000443016 BCAT1P54687 386 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 COG7P83436 770 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 KCNJ12Q14500 433 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 FILIP1LQ4L180 1135 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 ARHGAP17Q68EM7 881 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 KBTBD6Q86V97 674 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 SFTPA1Q8IWL2 248 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 WBP2Q969T9 261 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 TPSD1Q9BZJ3 242 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 ARRDC1-AS1Q9H2J1 176 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 PARD6AQ9NPB6 346 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 ZDHHC4Q9NPG8 344 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 DNAJC17Q9NVM6 304 aaKnown RBP9.18□□□□□ -0.94
USP6NL-203ENST00000443016 EBF1Q9UH73 591 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 MMP17Q9ULZ9 603 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 USP3Q9Y6I4 520 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 MYOFQ9NZM1 2061 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 TPRP12270 2363 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms