RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 NCDNQ9UBB6 729 aa23.15■■□□□ 1.3
HDLBP-220ENST00000442730 AGO1Q9UL18 857 aaKnown RBP23.15■■□□□ 1.3
HDLBP-220ENST00000442730 MMP17Q9ULZ9 603 aa23.15■■□□□ 1.3
HDLBP-220ENST00000442730 TRIM24O15164 1050 aa23.14■■□□□ 1.29
HDLBP-220ENST00000442730 THAP12O43422 761 aa23.14■■□□□ 1.29
HDLBP-220ENST00000442730 MED7O43513 233 aa23.14■■□□□ 1.29
HDLBP-220ENST00000442730 FBXO21O94952 628 aa23.14■■□□□ 1.29
HDLBP-220ENST00000442730 APBB3O95704 486 aa23.14■■□□□ 1.29
HDLBP-220ENST00000442730 SIM2Q14190 667 aaPredicted RBP23.14■■□□□ 1.29
HDLBP-220ENST00000442730 TRIP4Q15650 581 aaPredicted RBP23.14■■□□□ 1.29
HDLBP-220ENST00000442730 LPAL2Q16609 132 aa23.14■■□□□ 1.29
HDLBP-220ENST00000442730 GRAMD4Q6IC98 578 aa23.14■■□□□ 1.29
HDLBP-220ENST00000442730 DPY19L2P1Q6NXN4 242 aa23.14■■□□□ 1.29
HDLBP-220ENST00000442730 PRR23BQ6ZRT6 265 aa23.14■■□□□ 1.29
HDLBP-220ENST00000442730 DENND1CQ8IV53 801 aa23.14■■□□□ 1.29
HDLBP-220ENST00000442730 CCDC33Q8N5R6 958 aa23.14■■□□□ 1.29
HDLBP-220ENST00000442730 ALLCQ8N6M5 410 aa23.14■■□□□ 1.29
HDLBP-220ENST00000442730 IL17RCQ8NAC3 791 aa23.14■■□□□ 1.29
HDLBP-220ENST00000442730 ZNF606Q8WXB4 792 aa23.14■■□□□ 1.29
HDLBP-220ENST00000442730 HBS1LQ9Y450 684 aaKnown RBP23.14■■□□□ 1.29
HDLBP-220ENST00000442730 NFE2L3Q9Y4A8 694 aa23.14■■□□□ 1.29
HDLBP-220ENST00000442730 SPTBN4Q9H254 2564 aa23.14■■□□□ 1.29
HDLBP-220ENST00000442730 TBC1D3BA6NDS4 549 aa23.13■■□□□ 1.29
HDLBP-220ENST00000442730 MSI1O43347 362 aaKnown RBP23.13■■□□□ 1.29
HDLBP-220ENST00000442730 PENKP01210 267 aaPredicted RBP23.13■■□□□ 1.29
HDLBP-220ENST00000442730 EEF1GP26641 437 aaKnown RBP23.13■■□□□ 1.29
HDLBP-220ENST00000442730 USP8P40818 1118 aa23.13■■□□□ 1.29
HDLBP-220ENST00000442730 PREPLQ4J6C6 727 aaPredicted RBP23.13■■□□□ 1.29
HDLBP-220ENST00000442730 TCP11X2Q5H9J9 407 aa23.13■■□□□ 1.29
HDLBP-220ENST00000442730 C10orf76Q5T2E6 689 aa23.13■■□□□ 1.29
HDLBP-220ENST00000442730 SMYD5Q6GMV2 418 aa23.13■■□□□ 1.29
HDLBP-220ENST00000442730 MSANTD2Q6P1R3 559 aa23.13■■□□□ 1.29
HDLBP-220ENST00000442730 FAM217AQ8IXS0 508 aa23.13■■□□□ 1.29
HDLBP-220ENST00000442730 ENOX1Q8TC92 643 aaKnown RBP23.13■■□□□ 1.29
HDLBP-220ENST00000442730 BHMTQ93088 406 aa23.13■■□□□ 1.29
HDLBP-220ENST00000442730 XPO6Q96QU8 1125 aaKnown RBP23.13■■□□□ 1.29
HDLBP-220ENST00000442730 EBF1Q9UH73 591 aa23.13■■□□□ 1.29
HDLBP-220ENST00000442730 SFMBT1Q9UHJ3 866 aa23.13■■□□□ 1.29
HDLBP-220ENST00000442730 CYTH4Q9UIA0 394 aa23.13■■□□□ 1.29
HDLBP-220ENST00000442730 RAB23Q9ULC3 237 aa23.13■■□□□ 1.29
HDLBP-220ENST00000442730 KLF8O95600 359 aaPredicted RBP23.12■■□□□ 1.29
HDLBP-220ENST00000442730 LTFP02788 710 aa23.12■■□□□ 1.29
HDLBP-220ENST00000442730 TIE1P35590 1138 aa23.12■■□□□ 1.29
HDLBP-220ENST00000442730 HSF5Q4G112 596 aaPredicted RBP23.12■■□□□ 1.29
HDLBP-220ENST00000442730 EMC10Q5UCC4 262 aa23.12■■□□□ 1.29
HDLBP-220ENST00000442730 FYB2Q5VWT5 728 aa23.12■■□□□ 1.29
HDLBP-220ENST00000442730 LAIR1Q6GTX8 287 aa23.12■■□□□ 1.29
HDLBP-220ENST00000442730 TXNDC5Q8NBS9 432 aaKnown RBP23.12■■□□□ 1.29
HDLBP-220ENST00000442730 TSTD1Q8NFU3 115 aa23.12■■□□□ 1.29
HDLBP-220ENST00000442730 STK32AQ8WU08 396 aa23.12■■□□□ 1.29
HDLBP-220ENST00000442730 GAB3Q8WWW8 586 aa23.12■■□□□ 1.29
HDLBP-220ENST00000442730 SLC4A5Q9BY07 1137 aa23.12■■□□□ 1.29
HDLBP-220ENST00000442730 MIS12Q9H081 205 aa23.12■■□□□ 1.29
HDLBP-220ENST00000442730 ZDHHC4Q9NPG8 344 aa23.12■■□□□ 1.29
HDLBP-220ENST00000442730 ST7Q9NRC1 585 aa23.12■■□□□ 1.29
HDLBP-220ENST00000442730 DNAJC12Q9UKB3 198 aa23.12■■□□□ 1.29
HDLBP-220ENST00000442730 DMXL1Q9Y485 3027 aa23.11■■□□□ 1.29
HDLBP-220ENST00000442730 SGK1O00141 431 aa23.11■■□□□ 1.29
HDLBP-220ENST00000442730 AXIN1O15169 862 aa23.11■■□□□ 1.29
HDLBP-220ENST00000442730 RPP40O75818 363 aaKnown RBP23.11■■□□□ 1.29
HDLBP-220ENST00000442730 HNRNPLP14866 589 aaKnown RBP eCLIP23.11■■□□□ 1.29
HDLBP-220ENST00000442730 CHKAP35790 457 aa23.11■■□□□ 1.29
HDLBP-220ENST00000442730 CRY1Q16526 586 aa23.11■■□□□ 1.29
HDLBP-220ENST00000442730 CDKAL1Q5VV42 579 aa23.11■■□□□ 1.29
HDLBP-220ENST00000442730 C11orf57Q6ZUT1 292 aaPredicted RBP23.11■■□□□ 1.29
HDLBP-220ENST00000442730 TOGARAM2Q6ZUX3 1019 aa23.11■■□□□ 1.29
HDLBP-220ENST00000442730 CPXM2Q8N436 756 aa23.11■■□□□ 1.29
HDLBP-220ENST00000442730 PLK2Q9NYY3 685 aa23.11■■□□□ 1.29
HDLBP-220ENST00000442730 GMEB2Q9UKD1 530 aa23.11■■□□□ 1.29
HDLBP-220ENST00000442730 HCN2Q9UL51 889 aa23.11■■□□□ 1.29
HDLBP-220ENST00000442730 ADAM23O75077 832 aa23.1■■□□□ 1.29
HDLBP-220ENST00000442730 CISD3P0C7P0 127 aa23.1■■□□□ 1.29
HDLBP-220ENST00000442730 PNMA6AP0CW24 399 aaPredicted RBP23.1■■□□□ 1.29
HDLBP-220ENST00000442730 ACADSBP45954 432 aa23.1■■□□□ 1.29
HDLBP-220ENST00000442730 HARS2P49590 506 aaKnown RBP23.1■■□□□ 1.29
HDLBP-220ENST00000442730 DGKEP52429 567 aa23.1■■□□□ 1.29
HDLBP-220ENST00000442730 PDCLQ13371 301 aa23.1■■□□□ 1.29
HDLBP-220ENST00000442730 CCDC183Q5T5S1 534 aa23.1■■□□□ 1.29
HDLBP-220ENST00000442730 CEP68Q76N32 757 aa23.1■■□□□ 1.29
HDLBP-220ENST00000442730 SCUBE3Q8IX30 993 aa23.1■■□□□ 1.29
HDLBP-220ENST00000442730 KIAA2013Q8IYS2 634 aa23.1■■□□□ 1.29
HDLBP-220ENST00000442730 KCNV2Q8TDN2 545 aa23.1■■□□□ 1.29
HDLBP-220ENST00000442730 GOLGA1Q92805 767 aa23.1■■□□□ 1.29
HDLBP-220ENST00000442730 FBXO10Q9UK96 956 aa23.1■■□□□ 1.29
HDLBP-220ENST00000442730 E5RJQ4 531 aa23.09■■□□□ 1.29
HDLBP-220ENST00000442730 SART1O43290 800 aaKnown RBP23.09■■□□□ 1.29
HDLBP-220ENST00000442730 IGLV3-27P01718 113 aa23.09■■□□□ 1.29
HDLBP-220ENST00000442730 FYNP06241 537 aa23.09■■□□□ 1.29
HDLBP-220ENST00000442730 DGKGP49619 791 aa23.09■■□□□ 1.29
HDLBP-220ENST00000442730 KCNMA1Q12791 1236 aa23.09■■□□□ 1.29
HDLBP-220ENST00000442730 STX1AQ16623 288 aa23.09■■□□□ 1.29
HDLBP-220ENST00000442730 EOGTQ5NDL2 527 aa23.09■■□□□ 1.29
HDLBP-220ENST00000442730 TMEM92Q6UXU6 159 aa23.09■■□□□ 1.29
HDLBP-220ENST00000442730 NUDT18Q6ZVK8 323 aa23.09■■□□□ 1.29
HDLBP-220ENST00000442730 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.09■■□□□ 1.29
HDLBP-220ENST00000442730 TMEM110Q86TL2 294 aa23.09■■□□□ 1.29
HDLBP-220ENST00000442730 RASSF3Q86WH2 238 aa23.09■■□□□ 1.29
HDLBP-220ENST00000442730 ZNF513Q8N8E2 541 aaPredicted RBP23.09■■□□□ 1.29
HDLBP-220ENST00000442730 TAB2Q9NYJ8 693 aa23.09■■□□□ 1.29
HDLBP-220ENST00000442730 STOML2Q9UJZ1 356 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms