RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 CDK7P50613 346 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 RPL10AP62906 217 aaKnown RBP14.61□□□□□ -0.07
MCF2L-218ENST00000442625 ROR1Q01973 937 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 NBPF12Q5TAG4 269 aaPredicted RBP14.61□□□□□ -0.07
MCF2L-218ENST00000442625 C6orf163Q5TEZ5 329 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 CRLF3Q8IUI8 442 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 NIM1KQ8IY84 436 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 OR6Y1Q8NGX8 325 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 DHRS1Q96LJ7 313 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 PDGFDQ9GZP0 370 aaPredicted RBP14.61□□□□□ -0.07
MCF2L-218ENST00000442625 RABL2AQ9UBK7 228 aaPredicted RBP14.61□□□□□ -0.07
MCF2L-218ENST00000442625 BRWD3Q6RI45 1802 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 hCG_2014768A0A024R1R8 64 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 F8W8V4 182 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 PROCP04070 461 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 GJB1P08034 283 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 SNRPAP09012 282 aaKnown RBP14.61□□□□□ -0.07
MCF2L-218ENST00000442625 TAP1Q03518 808 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 KCNJ11Q14654 390 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 DUOXA2Q1HG44 320 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 C15orf59Q2T9L4 293 aaPredicted RBP14.61□□□□□ -0.07
MCF2L-218ENST00000442625 EEPD1Q7L9B9 569 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 TMEM110Q86TL2 294 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 LRRC71Q8N4P6 559 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 ZBED3Q96IU2 234 aaPredicted RBP14.61□□□□□ -0.07
MCF2L-218ENST00000442625 TWNKQ96RR1 684 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 WWP1Q9H0M0 922 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 S100A14Q9HCY8 104 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.61□□□□□ -0.074e-6■■■□□ 18.4
MCF2L-218ENST00000442625 STK32BQ9NY57 414 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 IL1RAPL1Q9NZN1 696 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 RGPD3A6NKT7 1758 aaPredicted RBP14.6□□□□□ -0.07
MCF2L-218ENST00000442625 RGPD4Q7Z3J3 1758 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 MYOCOSA0A1B0GUC4 107 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 ATG7O95352 703 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 CDH6P55285 790 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 BACE1P56817 501 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 CRADDP78560 199 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 GSTA3Q16772 222 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 DPY19L2Q6NUT2 758 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 HPS6Q86YV9 775 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 TTC13Q8NBP0 860 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 NETO2Q8NC67 525 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 PIWIL1Q96J94 861 aaKnown RBP14.6□□□□□ -0.07
MCF2L-218ENST00000442625 CDHR1Q96JP9 859 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 PGLYRP2Q96PD5 576 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 PCYT2Q99447 389 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 ZNF518BQ9C0D4 1074 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 XYLT2Q9H1B5 865 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 ACSS2Q9NR19 701 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 APOC4-APOC2K7ER74 178 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 MSCO60682 206 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 APOC2P02655 101 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 RBL1P28749 1068 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 ADORA2AP29274 412 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 CCNIQ14094 377 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 HIC1Q14526 733 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 CAND1Q86VP6 1230 aaKnown RBP14.6□□□□□ -0.07
MCF2L-218ENST00000442625 XYLT1Q86Y38 959 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 TMEM192Q8IY95 271 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 ADGRF2Q8IZF7 708 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 MTMR14Q8NCE2 650 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 LSM14AQ8ND56 463 aaKnown RBP14.6□□□□□ -0.07
MCF2L-218ENST00000442625 PPP1R14CQ8TAE6 165 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 C7orf26Q96N11 449 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 MAGEB5Q9BZ81 275 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 POPDC2Q9HBU9 364 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 DMAP1Q9NPF5 467 aaPredicted RBP14.6□□□□□ -0.07
MCF2L-218ENST00000442625 USP18Q9UMW8 372 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 PCDHGC3Q9UN70 934 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 DNAJC16Q9Y2G8 782 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 TMEM98Q9Y2Y6 226 aa14.6□□□□□ -0.07
MCF2L-218ENST00000442625 KRT37O76014 449 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 CDH5P33151 784 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-218ENST00000442625 SERPINB6P35237 376 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 MSX2P35548 267 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-218ENST00000442625 STX3Q13277 289 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 FBXL19Q6PCT2 694 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 MARK2Q7KZI7 788 aaKnown RBP14.59□□□□□ -0.07
MCF2L-218ENST00000442625 SAMD7Q7Z3H4 446 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 DHDDSQ86SQ9 333 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 PDSS2Q86YH6 399 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 RNF149Q8NC42 400 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 AGBL3Q8NEM8 1001 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 GDPD5Q8WTR4 605 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 FAM172AQ8WUF8 416 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 FAM192AQ9GZU8 254 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 PNPOQ9NVS9 261 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 SIRPGQ9P1W8 387 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 NDC80O14777 642 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 HOXC6P09630 235 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 POLR2BP30876 1174 aaKnown RBP14.59□□□□□ -0.07
MCF2L-218ENST00000442625 YWHAEP62258 255 aaKnown RBP14.59□□□□□ -0.07
MCF2L-218ENST00000442625 SFSWAPQ12872 951 aaKnown RBP14.59□□□□□ -0.07
MCF2L-218ENST00000442625 TRIP10Q15642 601 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 EFHC1Q5JVL4 640 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 ATG16L1Q676U5 607 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 UNC5AQ6ZN44 842 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 TRIM50Q86XT4 487 aa14.59□□□□□ -0.07
MCF2L-218ENST00000442625 RTKN2Q8IZC4 609 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms