RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ARID3AQ99856 593 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 UBXN6Q9BZV1 441 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 LRRC4Q9HBW1 653 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 OLA1Q9NTK5 396 aaKnown RBP12.36□□□□□ -0.43
TTC28-203ENST00000442232 MARCH2Q9P0N8 246 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 CALCOCO1Q9P1Z2 691 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 ARMCX3Q9UH62 379 aaPredicted RBP12.36□□□□□ -0.43
TTC28-203ENST00000442232 EVLQ9UI08 416 aaPredicted RBP12.36□□□□□ -0.43
TTC28-203ENST00000442232 USP3Q9Y6I4 520 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 SLC12A8A0AV02 714 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 GFRA2O00451 464 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 TRIM24O15164 1050 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 GREM1O60565 184 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 ZBED1O96006 694 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 GABRG2P18507 467 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 HOXD12P35452 270 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 PPP1R2P41236 205 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 TKTL1P51854 596 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 ATXN3P54252 364 aaPredicted RBP12.35□□□□□ -0.43
TTC28-203ENST00000442232 RAD23BP54727 409 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 YWHAGP61981 247 aaKnown RBP eCLIP12.35□□□□□ -0.43
TTC28-203ENST00000442232 BST2Q10589 180 aaKnown RBP12.35□□□□□ -0.43
TTC28-203ENST00000442232 CETN1Q12798 172 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 CUL2Q13617 745 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 MAP7D1Q3KQU3 841 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 UAP1L1Q3KQV9 507 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 N4BP2L1Q5TBK1 243 aaPredicted RBP12.35□□□□□ -0.43
TTC28-203ENST00000442232 KIAA1324Q6UXG2 1013 aaKnown RBP12.35□□□□□ -0.43
TTC28-203ENST00000442232 SCD5Q86SK9 330 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 PIGZQ86VD9 579 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 FMR1NBQ8N0W7 255 aaPredicted RBP12.35□□□□□ -0.43
TTC28-203ENST00000442232 SIX6OS1Q8N1H7 587 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 ANKRD52Q8NB46 1076 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 CEP76Q8TAP6 659 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 RNF139Q8WU17 664 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 PLD4Q96BZ4 506 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 METTL14Q9HCE5 456 aaKnown RBP12.35□□□□□ -0.43
TTC28-203ENST00000442232 PLK2Q9NYY3 685 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 GTF3C3Q9Y5Q9 886 aa12.35□□□□□ -0.43
TTC28-203ENST00000442232 ATXN2Q99700 1313 aaKnown RBP12.35□□□□□ -0.43
TTC28-203ENST00000442232 CACNA1BQ00975 2339 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 PATE3B3GLJ2 98 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 TM4SF5O14894 197 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 XPO1O14980 1071 aaKnown RBP12.34□□□□□ -0.43
TTC28-203ENST00000442232 NPC1O15118 1278 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 NDUFS2O75306 463 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 CFIP05156 583 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 SETSIPP0DME0 302 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 CHRM1P11229 460 aaPredicted RBP12.34□□□□□ -0.43
TTC28-203ENST00000442232 PTGER3P43115 390 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 MCCD1P59942 119 aaPredicted RBP12.34□□□□□ -0.43
TTC28-203ENST00000442232 ARID5AQ03989 594 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 ST3GAL2Q16842 350 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 CCDC40Q4G0X9 1142 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 CBWD6Q4V339 395 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 CBWD3Q5JTY5 395 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 CBWD5Q5RIA9 395 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 ANKRD40Q6AI12 368 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 TOGARAM2Q6ZUX3 1019 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 ANKS1BQ7Z6G8 1248 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 IPO4Q8TEX9 1081 aaKnown RBP12.34□□□□□ -0.43
TTC28-203ENST00000442232 TATDN2Q93075 761 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 SLC32A1Q9H598 525 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 CACNA2D2Q9NY47 1150 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 MBD1Q9UIS9 605 aaPredicted RBP12.34□□□□□ -0.43
TTC28-203ENST00000442232 TSPAN16Q9UKR8 245 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 CYP8B1Q9UNU6 501 aa12.34□□□□□ -0.43
TTC28-203ENST00000442232 A0A1W2PQF6 199 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 PRRT4C9JH25 899 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 SYNCRIPO60506 623 aaKnown RBP12.33□□□□□ -0.44
TTC28-203ENST00000442232 PENKP01210 267 aaPredicted RBP12.33□□□□□ -0.44
TTC28-203ENST00000442232 VDRP11473 427 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 NDUFV2P19404 249 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 ITPKAP23677 461 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 PMLP29590 882 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 MAPK8P45983 427 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 HARS2P49590 506 aaKnown RBP12.33□□□□□ -0.44
TTC28-203ENST00000442232 IRX4P78413 519 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 ZNF252P-AS1Q0IIN9 211 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 ADIGQ0VDE8 80 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 LRMPQ12912 555 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 DUOXA1Q1HG43 343 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 RAB41Q5JT25 222 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 SH3PXD2AQ5TCZ1 1133 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 DENND1CQ8IV53 801 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 ZC3H3Q8IXZ2 948 aaKnown RBP12.33□□□□□ -0.44
TTC28-203ENST00000442232 HDDC3Q8N4P3 179 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 DDI1Q8WTU0 396 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 GOLGA1Q92805 767 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 ERLEC1Q96DZ1 483 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 CEP63Q96MT8 703 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 TIGD1Q96MW7 591 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 NT5C1BQ96P26 610 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 ACOX2Q99424 681 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 GABRG3Q99928 467 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 ULBP1Q9BZM6 244 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 AGO1Q9UL18 857 aaKnown RBP12.33□□□□□ -0.44
TTC28-203ENST00000442232 KIAA1257Q9ULG3 409 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 SLC27A6Q9Y2P4 619 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 COQ4Q9Y3A0 265 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms