RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 YBEYP58557 167 aaPredicted RBP6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 BASP1P80723 227 aaKnown RBP6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 HTD2P86397 168 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CREMQ03060 361 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TNK2Q07912 1038 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CETN1Q12798 172 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 NOGQ13253 232 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CDK5R2Q13319 367 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ERV3-1Q14264 604 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 FAM110CQ1W6H9 321 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 XKR9Q5GH70 373 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TTC38Q5R3I4 469 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TRAPPC3LQ5T215 181 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 NEK5Q6P3R8 708 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 MEX3BQ6ZN04 569 aaKnown RBP6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 C15orf52Q6ZUT6 534 aaKnown RBP6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 KCTD1Q719H9 257 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 FBXO11Q86XK2 927 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 P3H2Q8IVL5 708 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ANKS4BQ8N8V4 417 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SIMC1Q8NDZ2 872 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ARHGAP45Q92619 1136 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 DACH2Q96NX9 599 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ADI1Q9BV57 179 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 GCOM2Q9BZD3 368 aaPredicted RBP6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 GPR62Q9BZJ7 368 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 KRT23Q9C075 422 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SENP6Q9GZR1 1112 aaPredicted RBP6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SMARCAD1Q9H4L7 1026 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 L2HGDHQ9H9P8 463 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 GJB4Q9NTQ9 266 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ZBTB40Q9NUA8 1239 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 LMCD1Q9NZU5 365 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 MYO1AQ9UBC5 1043 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PCDHA13Q9Y5I0 950 aa6.16□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 MROH5Q6ZUA9 1318 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 WDR19Q8NEZ3 1342 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 USP6P35125 1406 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 FER1L4A9Z1Z3 1794 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SLIT1O75093 1534 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 hCG_1807616A0A1W2PRN6 198 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PRAMEF25A6NGN4 478 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 C22orf46C9J442 243 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 AP3D1O14617 1153 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 FKTNO75072 461 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PIAS2O75928 621 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TUBB4AP04350 444 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ASGR1P07306 291 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ACTN1P12814 892 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PTPN1P18031 435 aaKnown RBP6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 FGFR2P21802 821 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PTGS1P23219 599 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CCT8P50990 548 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SLC12A3P55017 1021 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PLTPP55058 493 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 HADHBP55084 474 aaKnown RBP6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SLC8A3P57103 927 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 NKX6-1P78426 367 aaPredicted RBP6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CYP4F8P98187 520 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 DR1Q01658 176 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ACTN3Q08043 901 aaPredicted RBP6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 C17orf67Q0P5P2 114 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 BMPR2Q13873 1038 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 EFR3AQ14156 821 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CEP128Q6ZU80 1094 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 LYSMD2Q8IV50 215 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 Q8N1Y9 231 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 USHBP1Q8N6Y0 703 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SLC4A11Q8NBS3 891 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 KCTD6Q8NC69 237 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 C3orf20Q8ND61 904 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ETNPPLQ8TBG4 499 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 HTRA1Q92743 480 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 HS6ST2Q96MM7 605 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 DDX50Q9BQ39 737 aaKnown RBP6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PREBQ9HCU5 417 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 KCND1Q9NSA2 647 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 HSPBP1Q9NZL4 362 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ATPIF1Q9UII2 106 aa6.15□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 MAP3K19Q56UN5 1328 aa6.15□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 NRKQ7Z2Y5 1582 aa6.14□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 CAPN14A8MX76 684 aa6.14□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SHISA8B8ZZ34 492 aa6.14□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 VWA5AO00534 786 aa6.14□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ARHGAP6O43182 974 aa6.14□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 DYNC1LI2O43237 492 aaPredicted RBP6.14□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PGM3O95394 542 aa6.14□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 LTA4HP09960 611 aaKnown RBP6.14□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 CASTP20810 708 aaKnown RBP6.14□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ENDOUP21128 410 aaKnown RBP6.14□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 HNF1BP35680 557 aa6.14□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 VCPP55072 806 aaKnown RBP6.14□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 MRPS15P82914 257 aaKnown RBP6.14□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ERCC6LQ2NKX8 1250 aa6.14□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 TWISTNBQ3B726 338 aaPredicted RBP6.14□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ADCK5Q3MIX3 580 aa6.14□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 USP39Q53GS9 565 aaKnown RBP6.14□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 HSP90AA5PQ58FG0 334 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms