RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 RENBPP51606 427 aa5.65□□□□□ -1.5
PFDN4-202ENST00000441080 CCDC15Q0P6D6 951 aa5.65□□□□□ -1.5
PFDN4-202ENST00000441080 SEMA3BQ13214 749 aa5.65□□□□□ -1.5
PFDN4-202ENST00000441080 DNASE1L3Q13609 305 aa5.65□□□□□ -1.5
PFDN4-202ENST00000441080 MSANTD2Q6P1R3 559 aa5.65□□□□□ -1.5
PFDN4-202ENST00000441080 KLHL17Q6TDP4 642 aa5.65□□□□□ -1.5
PFDN4-202ENST00000441080 SERPINA13PQ6UXR4 307 aa5.65□□□□□ -1.5
PFDN4-202ENST00000441080 KRT27Q7Z3Y8 459 aa5.65□□□□□ -1.5
PFDN4-202ENST00000441080 BCDIN3DQ7Z5W3 292 aaKnown RBP5.65□□□□□ -1.5
PFDN4-202ENST00000441080 C12orf76Q8N812 135 aaPredicted RBP5.65□□□□□ -1.5
PFDN4-202ENST00000441080 BOLLQ8N9W6 283 aaKnown RBP5.65□□□□□ -1.5
PFDN4-202ENST00000441080 FAM71DQ8N9W8 422 aa5.65□□□□□ -1.5
PFDN4-202ENST00000441080 CCT6BQ92526 530 aa5.65□□□□□ -1.5
PFDN4-202ENST00000441080 REPS1Q96D71 796 aa5.65□□□□□ -1.5
PFDN4-202ENST00000441080 HS6ST2Q96MM7 605 aa5.65□□□□□ -1.5
PFDN4-202ENST00000441080 SAP30LQ9HAJ7 183 aa5.65□□□□□ -1.5
PFDN4-202ENST00000441080 VPS45Q9NRW7 570 aa5.65□□□□□ -1.5
PFDN4-202ENST00000441080 SERGEFQ9UGK8 458 aa5.65□□□□□ -1.5
PFDN4-202ENST00000441080 HERC5Q9UII4 1024 aaKnown RBP5.65□□□□□ -1.5
PFDN4-202ENST00000441080 PCDHB2Q9Y5E7 798 aa5.65□□□□□ -1.5
PFDN4-202ENST00000441080 MORC2Q9Y6X9 1032 aaPredicted RBP5.65□□□□□ -1.5
PFDN4-202ENST00000441080 H7C1Q1 480 aa5.64□□□□□ -1.51
PFDN4-202ENST00000441080 CTIFO43310 598 aaKnown RBP5.64□□□□□ -1.51
PFDN4-202ENST00000441080 PRAMEF2O60811 474 aa5.64□□□□□ -1.51
PFDN4-202ENST00000441080 IGLV2-14P01704 120 aa5.64□□□□□ -1.51
PFDN4-202ENST00000441080 APEHP13798 732 aaKnown RBP5.64□□□□□ -1.51
PFDN4-202ENST00000441080 GYS1P13807 737 aa5.64□□□□□ -1.51
PFDN4-202ENST00000441080 POLE2P56282 527 aa5.64□□□□□ -1.51
PFDN4-202ENST00000441080 GPC5P78333 572 aa5.64□□□□□ -1.51
PFDN4-202ENST00000441080 FOXO1Q12778 655 aa5.64□□□□□ -1.51
PFDN4-202ENST00000441080 GORABQ5T7V8 394 aa5.64□□□□□ -1.51
PFDN4-202ENST00000441080 SUMO4Q6EEV6 95 aa5.64□□□□□ -1.51
PFDN4-202ENST00000441080 SULT6B1Q6IMI4 303 aa5.64□□□□□ -1.51
PFDN4-202ENST00000441080 LIN54Q6MZP7 749 aa5.64□□□□□ -1.51
PFDN4-202ENST00000441080 MAFAQ8NHW3 353 aaPredicted RBP5.64□□□□□ -1.51
PFDN4-202ENST00000441080 EDC3Q96F86 508 aaKnown RBP5.64□□□□□ -1.51
PFDN4-202ENST00000441080 PRR11Q96HE9 360 aaPredicted RBP5.64□□□□□ -1.51
PFDN4-202ENST00000441080 RTKNQ9BST9 563 aa5.64□□□□□ -1.51
PFDN4-202ENST00000441080 PAGR1Q9BTK6 254 aa5.64□□□□□ -1.51
PFDN4-202ENST00000441080 PRDM13Q9H4Q3 707 aa5.64□□□□□ -1.51
PFDN4-202ENST00000441080 AGO4Q9HCK5 861 aaKnown RBP5.64□□□□□ -1.51
PFDN4-202ENST00000441080 FBXO28Q9NVF7 368 aa5.64□□□□□ -1.51
PFDN4-202ENST00000441080 SMIM22K7EJ46 135 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 GCATO75600 419 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 RPP40O75818 363 aaKnown RBP5.63□□□□□ -1.51
PFDN4-202ENST00000441080 C1QL1O75973 258 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 ACTL6BO94805 426 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 CER1O95813 267 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 MT-CO3P00414 261 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 ALADP13716 330 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 MMP8P22894 467 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 HALP42357 657 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 ELLP55199 621 aaPredicted RBP5.63□□□□□ -1.51
PFDN4-202ENST00000441080 CFHR3Q02985 330 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 TMEM63BQ5T3F8 832 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 ATPAF1Q5TC12 328 aaPredicted RBP5.63□□□□□ -1.51
PFDN4-202ENST00000441080 FBXO42Q6P3S6 717 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 TMEM65Q6PI78 240 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 SMC5Q8IY18 1101 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 EXOC8Q8IYI6 725 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 LINC01465Q8N7H1 131 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 ANKRD42Q8N9B4 389 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 FAM98AQ8NCA5 519 aaKnown RBP5.63□□□□□ -1.51
PFDN4-202ENST00000441080 OR1N1Q8NGS0 311 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 SLC22A17Q8WUG5 538 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 TRAPPC12Q8WVT3 735 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 HERPUD2Q9BSE4 406 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 SORBS1Q9BX66 1292 aaKnown RBP5.63□□□□□ -1.51
PFDN4-202ENST00000441080 MYLK2Q9H1R3 596 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 RXFP3Q9NSD7 469 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 ASIC5Q9NY37 505 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 NFU1Q9UMS0 254 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 VPS4AQ9UN37 437 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 UBE2J1Q9Y385 318 aaPredicted RBP5.63□□□□□ -1.51
PFDN4-202ENST00000441080 RIPOR2Q9Y4F9 1068 aa5.63□□□□□ -1.51
PFDN4-202ENST00000441080 GXYLT2A0PJZ3 443 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 LRRC3CA6NJW4 275 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 PROP1O75360 226 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 VEGFAP15692 232 aaPredicted RBP5.62□□□□□ -1.51
PFDN4-202ENST00000441080 GALNSP34059 522 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 IGHMBP2P38935 993 aaKnown RBP5.62□□□□□ -1.51
PFDN4-202ENST00000441080 JAK3P52333 1124 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 AP2B1P63010 937 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 RAE1P78406 368 aaKnown RBP5.62□□□□□ -1.51
PFDN4-202ENST00000441080 CBFBQ13951 182 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 PRKG1Q13976 671 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 DHX8Q14562 1220 aaKnown RBP5.62□□□□□ -1.51
PFDN4-202ENST00000441080 BTBD16Q32M84 506 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 DCDC5Q6ZRR9 648 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 RD3Q7Z3Z2 195 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 TRABD2AQ86V40 505 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 CCDC117Q8IWD4 279 aaPredicted RBP5.62□□□□□ -1.51
PFDN4-202ENST00000441080 NKAPQ8N5F7 415 aaKnown RBP5.62□□□□□ -1.51
PFDN4-202ENST00000441080 SPATA5Q8NB90 893 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 STT3BQ8TCJ2 826 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 RSC1A1Q92681 617 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 ZG16BQ96DA0 208 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 CCDC17Q96LX7 622 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 FYTTD1Q96QD9 318 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms