RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 NUDCD3Q8IVD9 361 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 MAP7D3Q8IWC1 876 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 METTL25Q8N6Q8 603 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 ZFP28Q8NHY6 868 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 ACTRT2Q8TDY3 377 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 SIKE1Q9BRV8 207 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 FRMD8P1Q9BZ68 369 aaPredicted RBP12.31□□□□□ -0.44
LTBR-203ENST00000441074 DDX18Q9NVP1 670 aaKnown RBP12.31□□□□□ -0.44
LTBR-203ENST00000441074 DDX56Q9NY93 547 aaKnown RBP12.31□□□□□ -0.44
LTBR-203ENST00000441074 DTNAQ9Y4J8 743 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.31□□□□□ -0.44
LTBR-203ENST00000441074 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.31□□□□□ -0.44
LTBR-203ENST00000441074 TCRBV7S3A2A0A539 114 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 TMEM191CA6NGB0 347 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 CCDC160A6NGH7 325 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 DKC1O60832 514 aaKnown RBP eCLIP12.31□□□□□ -0.44
LTBR-203ENST00000441074 TMEM63AO94886 807 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 TMEM191BP0C7N4 346 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 KITP10721 976 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 SERPINB8P50452 374 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 STXBP2Q15833 593 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 GRAMD1BQ3KR37 738 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 SLC39A4Q6P5W5 647 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 SLC26A11Q86WA9 606 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 RASAL3Q86YV0 1011 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 PASD1Q8IV76 773 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 IGDCC3Q8IVU1 814 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 CHST13Q8NET6 341 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 ABTB1Q969K4 478 aaPredicted RBP12.31□□□□□ -0.44
LTBR-203ENST00000441074 ZNF395Q9H8N7 513 aaPredicted RBP12.31□□□□□ -0.44
LTBR-203ENST00000441074 MARCOQ9UEW3 520 aaPredicted RBP12.31□□□□□ -0.44
LTBR-203ENST00000441074 XPO7Q9UIA9 1087 aaKnown RBP12.31□□□□□ -0.44
LTBR-203ENST00000441074 ITGA11Q9UKX5 1188 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 PCDHA10Q9Y5I2 948 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 SPATA31C2B4DYI2 1134 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 TRIM49D1C9J1S8 452 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 HNRNPDLO14979 420 aaKnown RBP12.3□□□□□ -0.44
LTBR-203ENST00000441074 STK10O94804 968 aaKnown RBP12.3□□□□□ -0.44
LTBR-203ENST00000441074 ARIH2O95376 493 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 HNRNPCP07910 306 aaKnown RBP eCLIP12.3□□□□□ -0.44
LTBR-203ENST00000441074 CFHP08603 1231 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 SNRPAP09012 282 aaKnown RBP12.3□□□□□ -0.44
LTBR-203ENST00000441074 CD48P09326 243 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 PMLP29590 882 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 SERPINB6P35237 376 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 ELK3P41970 407 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 EPHB1P54762 984 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 GDF10P55107 478 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 CLDN10P78369 228 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 MYLK3Q32MK0 819 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 RALGPS1Q5JS13 557 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 SPRYD7Q5W111 196 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 DUS1LQ6P1R4 473 aaKnown RBP12.3□□□□□ -0.44
LTBR-203ENST00000441074 AHI1Q8N157 1196 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 NUP93Q8N1F7 819 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 ZBTB8BQ8NAP8 495 aaPredicted RBP12.3□□□□□ -0.44
LTBR-203ENST00000441074 TTC13Q8NBP0 860 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 DDI1Q8WTU0 396 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 APBB2Q92870 758 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 GPRASP2Q96D09 838 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 GCNAQ96QF7 691 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 ZNF696Q9H7X3 374 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 MKS1Q9NXB0 559 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 THEGQ9P2T0 379 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 SLC9A2Q9UBY0 812 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 CDH22Q9UJ99 828 aa12.3□□□□□ -0.44
LTBR-203ENST00000441074 SF3B1O75533 1304 aaKnown RBP eCLIP12.3□□□□□ -0.44
LTBR-203ENST00000441074 H3BNX3 289 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 PDHXO00330 501 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 BIRC5O15392 142 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 DNAJA2O60884 412 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 KRT37O76014 449 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 WEE2P0C1S8 567 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 CPA3P15088 417 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 ALDH1A3P47895 512 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 GALK1P51570 392 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 COPAP53621 1224 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 RPL7AP62424 266 aaKnown RBP12.29□□□□□ -0.44
LTBR-203ENST00000441074 PSMD6Q15008 389 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 ZACNQ401N2 412 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 GJC2Q5T442 439 aaPredicted RBP12.29□□□□□ -0.44
LTBR-203ENST00000441074 KBTBD6Q86V97 674 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 CCDC33Q8N5R6 958 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 ZNF513Q8N8E2 541 aaPredicted RBP12.29□□□□□ -0.44
LTBR-203ENST00000441074 MCPH1Q8NEM0 835 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 RSAD2Q8WXG1 361 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 HHIPL1Q96JK4 782 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 MS4A4AQ96JQ5 239 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 EBF4Q9BQW3 602 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 STN1Q9H668 368 aaKnown RBP12.29□□□□□ -0.44
LTBR-203ENST00000441074 PNPLA8Q9NP80 782 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 UBAP1Q9NZ09 502 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 RAB26Q9ULW5 256 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 POMPQ9Y244 141 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 EFR3BQ9Y2G0 817 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 INPP5FQ9Y2H2 1132 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 SH3GLB1Q9Y371 365 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 PARP14Q460N5 1801 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 A0A0B4J269 797 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 TMEM221A6NGB7 291 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms