RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 KCTD13Q8WZ19 329 aa17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 LRRC4Q9HBW1 653 aa17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 OLA1Q9NTK5 396 aaKnown RBP17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 MARCH2Q9P0N8 246 aa17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 BCCIPQ9P287 314 aaKnown RBP eCLIP17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 FBXO10Q9UK96 956 aa17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 CTNND2Q9UQB3 1225 aa17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 INVSQ9Y283 1065 aa17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 RALGAPA1Q6GYQ0 2036 aa17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 GADD45BO75293 160 aaPredicted RBP17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 CAVIN2O95810 425 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 GNA14O95837 355 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 CISD3P0C7P0 127 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 HOXB2P14652 356 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 ADIGQ0VDE8 80 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 PAK1Q13153 545 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 BYSLQ13895 437 aaKnown RBP17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 EGFLAMQ63HQ2 1017 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 TMEM270Q6UE05 265 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 LCLAT1Q6UWP7 414 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 TOGARAM2Q6ZUX3 1019 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 TRIM59Q8IWR1 403 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 PPM1KQ8N3J5 372 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 CPXM2Q8N436 756 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 LMO3Q8TAP4 145 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 PLD4Q96BZ4 506 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 P2RY11Q96G91 374 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 IPO9Q96P70 1041 aaKnown RBP17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 GABRG3Q99928 467 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 SMOC1Q9H4F8 434 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 RXFP3Q9NSD7 469 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 SLC27A6Q9Y2P4 619 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 LAMA1P25391 3075 aa17.05■□□□□ 0.32
SNRPD3-204ENST00000439775 A0A1W2PQF6 199 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 PRRT4C9JH25 899 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 GCNT1Q02742 428 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 STILQ15468 1287 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 MAP7D1Q3KQU3 841 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 SPDYCQ5MJ68 293 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 FYB2Q5VWT5 728 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 IL31Q6EBC2 164 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 TCEAL6Q6IPX3 200 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 CYP2U1Q7Z449 544 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 FAM217AQ8IXS0 508 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 CHPFQ8IZ52 775 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 SIX6OS1Q8N1H7 587 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 TRIML1Q8N9V2 468 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 BHMTQ93088 406 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 TCEAL3Q969E4 200 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 CD248Q9HCU0 757 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 CNGB3Q9NQW8 809 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 PLK2Q9NYY3 685 aa17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 AGO1Q9UL18 857 aaKnown RBP17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNRPD3-204ENST00000439775 SLC12A8A0AV02 714 aa17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 GFRA2O00451 464 aa17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 BIN1O00499 593 aa17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 HMBSP08397 361 aa17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 GABRG2P18507 467 aa17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 TRIP4Q15650 581 aaPredicted RBP17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 PPM1JQ5JR12 505 aa17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 STPG1Q5TH74 334 aa17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 SDE2Q6IQ49 451 aa17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 LPCAT2Q7L5N7 544 aa17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 DENND1CQ8IV53 801 aa17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 UBA3Q8TBC4 463 aa17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 RLN3Q8WXF3 142 aa17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 TFAP2BQ92481 460 aa17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 ACOX2Q99424 681 aa17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 MBD1Q9UIS9 605 aaPredicted RBP17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 HBS1LQ9Y450 684 aaKnown RBP17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 PCDHB4Q9Y5E5 795 aa17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 PLXND1Q9Y4D7 1925 aa17.03■□□□□ 0.32
SNRPD3-204ENST00000439775 SDK1Q7Z5N4 2213 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 YJEFN3A6XGL0 299 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 E7ENQ6 273 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 TM4SF5O14894 197 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 NPC1O15118 1278 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 CYBBP04839 570 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 ZNF132P52740 706 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 MFAP3P55082 362 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 DAOAP59103 153 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 KCNH2Q12809 1159 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 CNGA2Q16280 664 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 BSPRYQ5W0U4 402 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 FMNL3Q8IVF7 1028 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 PGBD3Q8N328 593 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 RBBP8NLQ8NC74 664 aaPredicted RBP17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 RNF139Q8WU17 664 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 SLC35F5Q8WV83 523 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 NDRG1Q92597 394 aaKnown RBP17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 KAT5Q92993 513 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 ZSWIM1Q9BR11 485 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 EDEM2Q9BV94 578 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 ABCC13Q9NSE7 274 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 CALCOCO1Q9P1Z2 691 aa17.02■□□□□ 0.32
SNRPD3-204ENST00000439775 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.02■□□□□ 0.329e-6■□□□□ 8.4
SNRPD3-204ENST00000439775 LNP1A1A4G5 178 aa17.01■□□□□ 0.31
SNRPD3-204ENST00000439775 M0QYV0 167 aa17.01■□□□□ 0.31
SNRPD3-204ENST00000439775 RNF225M0QZC1 329 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms