RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 DHX15O43143 795 aaKnown RBP16.32■□□□□ 0.2
DHFR-201ENST00000439211 CST8O60676 142 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 MAGEC1O60732 1142 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 POLR2BP30876 1174 aaKnown RBP16.32■□□□□ 0.2
DHFR-201ENST00000439211 HMGCS2P54868 508 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 ACTR2P61160 394 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 PRAMEP78395 509 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 MAMLD1Q13495 774 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 ADRM1Q16186 407 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 SLFN12LQ6IEE8 588 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 GPAT2Q6NUI2 795 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 PPP4R1Q8TF05 950 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 FAM172AQ8WUF8 416 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 CAPSLQ8WWF8 208 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 PSPC1Q8WXF1 523 aaKnown RBP16.32■□□□□ 0.2
DHFR-201ENST00000439211 FAM111AQ96PZ2 611 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 LAMB2P55268 1798 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 CFLARO15519 480 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 PSTPIP1O43586 416 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 ALDH1A3P47895 512 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 SMUG1Q53HV7 270 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 POTEHQ6S545 545 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 AAASQ9NRG9 546 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 TFAP2AP05549 437 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 PSMC3P17980 439 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 TBXAS1P24557 533 aaPredicted RBP16.31■□□□□ 0.2
DHFR-201ENST00000439211 TNFAIP1Q13829 316 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 TDRD10Q5VZ19 366 aaKnown RBP16.31■□□□□ 0.2
DHFR-201ENST00000439211 DARS2Q6PI48 645 aaKnown RBP16.31■□□□□ 0.2
DHFR-201ENST00000439211 GPR141Q7Z602 305 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 CRLF3Q8IUI8 442 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 EXD1Q8NHP7 514 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 ZNF606Q8WXB4 792 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 IRGQQ8WZA9 623 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 PSMC3IPQ9P2W1 217 aaPredicted RBP16.31■□□□□ 0.2
DHFR-201ENST00000439211 BCAP29Q9UHQ4 241 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 SOX13Q9UN79 622 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 SLC5A2P31639 672 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 STYK1Q6J9G0 422 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 ZNF677Q86XU0 584 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 TSPAN14Q8NG11 270 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 CFAP36Q96G28 342 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 CEP295NLQ96MC4 621 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 ZBED2Q9BTP6 218 aa16.31■□□□□ 0.2
DHFR-201ENST00000439211 AVENQ9NQS1 362 aaPredicted RBP16.31■□□□□ 0.2
DHFR-201ENST00000439211 DDHD2O94830 711 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 CALB1P05937 261 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 HSPA8P11142 646 aaKnown RBP16.3■□□□□ 0.2
DHFR-201ENST00000439211 RXRBP28702 533 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 HSD17B4P51659 736 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 RGS21Q2M5E4 152 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 BSPRYQ5W0U4 402 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 LPAR1Q92633 364 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 BORCS5Q969J3 196 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 NLRP4Q96MN2 994 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 ZNF302Q9NR11 478 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 DAPK2Q9UIK4 370 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 FZD1Q9UP38 647 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 NPM3O75607 178 aaKnown RBP16.3■□□□□ 0.2
DHFR-201ENST00000439211 MTA2O94776 668 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 MAP3K6O95382 1288 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 CCDC130P13994 396 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 GARTP22102 1010 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 SMAD1Q15797 465 aaKnown RBP16.3■□□□□ 0.2
DHFR-201ENST00000439211 ERI1Q8IV48 349 aaKnown RBP16.3■□□□□ 0.2
DHFR-201ENST00000439211 CCDC60Q8IWA6 550 aaPredicted RBP16.3■□□□□ 0.2
DHFR-201ENST00000439211 CALML6Q8TD86 181 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 PPP1R10Q96QC0 940 aaKnown RBP16.3■□□□□ 0.2
DHFR-201ENST00000439211 GIN1Q9NXP7 522 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 GINS2Q9Y248 185 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 C1orf232A0A0U1RR37 186 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 NOTOA8MTQ0 251 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 NR1D2Q14995 579 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 PDK1Q15118 436 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 ZNF423Q2M1K9 1284 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 XKR3Q5GH77 459 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 OGFOD2Q6N063 350 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 EMC1Q8N766 993 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 GLIS1Q8NBF1 620 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 SKA1Q96BD8 255 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 TPK1Q9H3S4 243 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 DDX56Q9NY93 547 aaKnown RBP16.3■□□□□ 0.2
DHFR-201ENST00000439211 MOSPD1Q9UJG1 213 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 PACSIN3Q9UKS6 424 aa16.3■□□□□ 0.2
DHFR-201ENST00000439211 BTBD19C9JJ37 291 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 CYP2C9P11712 490 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 KRT3P12035 628 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 ACADVLP49748 655 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 TFDP1Q14186 410 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 SIX1Q15475 284 aaPredicted RBP16.29■□□□□ 0.2
DHFR-201ENST00000439211 ZNF699Q32M78 642 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 PLEKHG4Q58EX7 1191 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 RNF19BQ6ZMZ0 732 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 CDHR1Q96JP9 859 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 MTMR12Q9C0I1 747 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 RABGEF1Q9UJ41 708 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 K7EPI3 171 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 TNNC2P02585 160 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 CTC1Q2NKJ3 1217 aa16.29■□□□□ 0.2
DHFR-201ENST00000439211 ZBTB41Q5SVQ8 909 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms