RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 APOL1O14791 398 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 CHADO15335 359 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 TREHO43280 583 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 SPAG6O75602 509 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 ARHGEF15O94989 841 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 FSBPO95073 299 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 CA3P07451 260 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 VIMP08670 466 aaKnown RBP11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 GHRP10912 638 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 LRPAP1P30533 357 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 HOXC8P31273 242 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 ATP5OP48047 213 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 RGS7P49802 495 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 BCAR1P56945 870 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 IL9RQ01113 521 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 RNASELQ05823 741 aaKnown RBP11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 KLHL38Q2WGJ6 581 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 LACTB2Q53H82 288 aaPredicted RBP11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 ANKRD20A8PQ5CZ79 823 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 UBAP2Q5T6F2 1119 aaKnown RBP11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 RNF187Q5TA31 235 aaPredicted RBP11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 SLC9A4Q6AI14 798 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 SCYL2Q6P3W7 929 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 VSTM1Q6UX27 236 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 CYP4V2Q6ZWL3 525 aaPredicted RBP11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 BZW1Q7L1Q6 419 aaKnown RBP11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 STRADAQ7RTN6 431 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 PRUNE1Q86TP1 453 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 SCUBE3Q8IX30 993 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 PALM2Q8IXS6 379 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 CNPY4Q8N129 248 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 PLD5Q8N7P1 536 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 FAM172AQ8WUF8 416 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 HLA-CQ95604 372 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 C18orf25Q96B23 403 aaPredicted RBP11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 FAF2Q96CS3 445 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 RTP4Q96DX8 246 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 SCLYQ96I15 445 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 PWWP2AQ96N64 755 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 PEBP4Q96S96 227 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 HNRNPABQ99729 332 aaKnown RBP11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 ZNF670Q9BS34 389 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 VPS37BQ9H9H4 285 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 CHST12Q9NRB3 414 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 SLC38A7Q9NVC3 462 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 TUBGCP4Q9UGJ1 667 aa11.47□□□□□ -0.57
ERGIC3-207ENST00000438317 BRWD1Q9NSI6 2320 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 ZBBXA8MT70 800 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 RASA4BC9J798 803 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 M0QZ92 97 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 PPEF2O14830 753 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 XPO1O14980 1071 aaKnown RBP11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 PRPF4O43172 522 aaKnown RBP eCLIP11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 PAPSS1O43252 624 aaPredicted RBP11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 RASA4O43374 803 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 LPXNO60711 386 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 CABYRO75952 493 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 GSTA2P09210 222 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 CD48P09326 243 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 PDGFRBP09619 1106 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 PAX3P23760 479 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 AKAP5P24588 427 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 GBP2P32456 591 aaPredicted RBP11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 GEMIN4P57678 1058 aaKnown RBP11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 FSCN1Q16658 493 aaKnown RBP11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 QPCTQ16769 361 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 C15orf59Q2T9L4 293 aaPredicted RBP11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 CCDC38Q502W7 563 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 EFHC2Q5JST6 749 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 TRNP1Q6NT89 227 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 TRABD2AQ86V40 505 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 CDKL3Q8IVW4 592 aaPredicted RBP11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 LRRC34Q8IZ02 419 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 ZBED8Q8IZ13 594 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 TMEM130Q8N3G9 435 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 FAM71DQ8N9W8 422 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 KBTBD7Q8WVZ9 684 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 ALKBH8Q96BT7 664 aaKnown RBP11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 MAGEB18Q96M61 343 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 MTG1Q9BT17 334 aaPredicted RBP11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 NXF3Q9H4D5 531 aaKnown RBP11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 PCDH18Q9HCL0 1135 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 NGRNQ9NPE2 291 aaKnown RBP11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 FAM49BQ9NUQ9 324 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 RCOR3Q9P2K3 495 aaPredicted RBP11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 SAE1Q9UBE0 346 aaPredicted RBP11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 GTF2IRD1Q9UHL9 959 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 XPO7Q9UIA9 1087 aaKnown RBP11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 HES2Q9Y543 173 aa11.46□□□□□ -0.57
ERGIC3-207ENST00000438317 FAM47DPA6NHR8 397 aa11.45□□□□□ -0.58
ERGIC3-207ENST00000438317 CCT8L1PA6NM43 557 aa11.45□□□□□ -0.58
ERGIC3-207ENST00000438317 TRIM66O15016 1216 aa11.45□□□□□ -0.58
ERGIC3-207ENST00000438317 IL4RP24394 825 aa11.45□□□□□ -0.58
ERGIC3-207ENST00000438317 L1CAMP32004 1257 aa11.45□□□□□ -0.58
ERGIC3-207ENST00000438317 STX2P32856 288 aa11.45□□□□□ -0.58
ERGIC3-207ENST00000438317 LILRA4P59901 499 aa11.45□□□□□ -0.58
ERGIC3-207ENST00000438317 ATP11AP98196 1134 aa11.45□□□□□ -0.58
ERGIC3-207ENST00000438317 PURAQ00577 322 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms