RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 BTBD6Q96KE9 485 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 SAMD11Q96NU1 681 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 KLHL5Q96PQ7 755 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 TGS1Q96RS0 853 aaKnown RBP7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 TCF25Q9BQ70 676 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 C11orf84Q9BUA3 381 aaPredicted RBP7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 ACBD3Q9H3P7 528 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 GOLPH3Q9H4A6 298 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 MRPL47Q9HD33 250 aaKnown RBP7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 PNPLA8Q9NP80 782 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 RRAGDQ9NQL2 400 aaPredicted RBP7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 PLA2G2EQ9NZK7 142 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 AFF4Q9UHB7 1163 aaKnown RBP7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 TMEM59LQ9UK28 342 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 SSX2IPQ9Y2D8 614 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 IRAK3Q9Y616 596 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 FNDC1Q4ZHG4 1894 aaPredicted RBP7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 A0A1W2PNR3 127 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 C2orf71A6NGG8 1288 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 XYLBO75191 536 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 GRAP2O75791 330 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 TNNT1P13805 278 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 ATF2P15336 505 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 ATF6P18850 670 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 IRS1P35568 1242 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 SNX16P57768 344 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 MRPS5P82675 430 aaKnown RBP7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 CREMQ03060 361 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 GPM6BQ13491 265 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 MESDQ14696 234 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 RAB30Q15771 203 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 IFI16Q16666 785 aaKnown RBP7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 MGAT5BQ3V5L5 792 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 FAM102AQ5T9C2 384 aaPredicted RBP7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 SAMD5Q5TGI4 173 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 TPGS2Q68CL5 300 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 PM20D1Q6GTS8 502 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 MRPL14Q6P1L8 145 aaKnown RBP7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 LILRA6Q6PI73 481 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 NLRP8Q86W28 1048 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 ZDHHC17Q8IUH5 632 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 TCEAL8Q8IYN2 117 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 SCML4Q8N228 414 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 EMC1Q8N766 993 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 STKLD1Q8NE28 680 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 TRIM58Q8NG06 486 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 SCAMP5Q8TAC9 235 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 MCEEQ96PE7 176 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 SEPT5Q99719 369 aaPredicted RBP7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 SELENOOQ9BVL4 669 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 ULBP1Q9BZM6 244 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 CERS4Q9HA82 394 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 LRRC4Q9HBW1 653 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 NPHS2Q9NP85 383 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 CNGB3Q9NQW8 809 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 TLR9Q9NR96 1032 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 IL37Q9NZH6 218 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 HSFX1Q9UBD0 423 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 DNAI1Q9UI46 699 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 MSRAQ9UJ68 235 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 ANAPC7Q9UJX3 599 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 HYOU1Q9Y4L1 999 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 SCINQ9Y6U3 715 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 PTPRSQ13332 1948 aa7.37□□□□□ -1.23
LSM3P3-201ENST00000436601 TSC2P49815 1807 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 EPOPA6NHQ4 379 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 C2CD4BA6NLJ0 364 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 TTLL8A6PVC2 850 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 YJEFN3A6XGL0 299 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 TMEM110-MUSTN1A8MSY1 372 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 E7ENQ6 273 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 MYO1FO00160 1098 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 TGM5O43548 720 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 NCK2O43639 380 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 PROSCO94903 275 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 FBXO21O94952 628 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 CSPG5O95196 566 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 FTCDO95954 541 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 ZBED1O96006 694 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 TUBB4AP04350 444 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 ATP1A1P05023 1023 aaKnown RBP7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 FYNP06241 537 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 USP17L7P0C7H9 530 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 SPATA31D3P0C874 917 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 COMTP21964 271 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 FLT3P36888 993 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 TUFMP49411 452 aaKnown RBP7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 PGFP49763 221 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 SLC5A3P53794 718 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 DAOAP59103 153 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 RNASE9P60153 205 aaKnown RBP7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 RPL10AP62906 217 aaKnown RBP7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 SMC1AQ14683 1233 aaKnown RBP7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 PTPROQ16827 1216 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 CCDC14Q49A88 953 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 EFHC1Q5JVL4 640 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 MEI1Q5TIA1 1274 aa7.36□□□□□ -1.23
LSM3P3-201ENST00000436601 PLPP4Q5VZY2 271 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms