RNA–Protein interactions for RNA: ENST00000435327.2

CCDC13-202, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-202ENST00000435327 RAB6CQ9H0N0 254 aa17.33■□□□□ 0.36
CCDC13-202ENST00000435327 MARCH2Q9P0N8 246 aa17.33■□□□□ 0.36
CCDC13-202ENST00000435327 ALG6Q9Y672 507 aa17.33■□□□□ 0.36
CCDC13-202ENST00000435327 SLC12A8A0AV02 714 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 NRG2O14511 850 aaPredicted RBP17.32■□□□□ 0.36
CCDC13-202ENST00000435327 IRAK2O43187 625 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 MSI1O43347 362 aaKnown RBP17.32■□□□□ 0.36
CCDC13-202ENST00000435327 COCHO43405 550 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 FTCDO95954 541 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 MBL2P11226 248 aaPredicted RBP17.32■□□□□ 0.36
CCDC13-202ENST00000435327 TNNT1P13805 278 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 CEBPBP17676 345 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 RDXP35241 583 aaKnown RBP17.32■□□□□ 0.36
CCDC13-202ENST00000435327 LTBRP36941 435 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 SLC1A1P43005 524 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 ITIH3Q06033 890 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 SKIV2LQ15477 1246 aaKnown RBP17.32■□□□□ 0.36
CCDC13-202ENST00000435327 CLUL1Q15846 466 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 STXBP5Q5T5C0 1151 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 SCYL2Q6P3W7 929 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 SND1Q7KZF4 910 aaKnown RBP eCLIP17.32■□□□□ 0.36
CCDC13-202ENST00000435327 PEX26Q7Z412 305 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 SLFN11Q7Z7L1 901 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 MIB1Q86YT6 1006 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 ARL14EPQ8N8R7 260 aaPredicted RBP17.32■□□□□ 0.36
CCDC13-202ENST00000435327 MAB21L3Q8N8X9 362 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 PPM1EQ8WY54 764 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 ING5Q8WYH8 240 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 CENPIQ92674 756 aaPredicted RBP17.32■□□□□ 0.36
CCDC13-202ENST00000435327 PGAP3Q96FM1 320 aaPredicted RBP17.32■□□□□ 0.36
CCDC13-202ENST00000435327 NCAPGQ9BPX3 1015 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 ADAM7Q9H2U9 754 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 MTMR10Q9NXD2 777 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.32■□□□□ 0.36
CCDC13-202ENST00000435327 CDH22Q9UJ99 828 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 DNMT3LQ9UJW3 386 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 AMFRQ9UKV5 643 aa17.32■□□□□ 0.36
CCDC13-202ENST00000435327 RANBP2P49792 3224 aaKnown RBP17.32■□□□□ 0.36
CCDC13-202ENST00000435327 CLUHO75153 1309 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 TRAV19A0A0A6YYK7 116 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 ESPNB1AK53 854 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 LRCH4O75427 683 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 ENDOD1O94919 500 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 F9P00740 461 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 HDCP19113 662 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 FSHRP23945 695 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 DDX6P26196 483 aaKnown RBP eCLIP17.31■□□□□ 0.36
CCDC13-202ENST00000435327 GJC1P36383 396 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 ATXN1P54253 815 aaKnown RBP17.31■□□□□ 0.36
CCDC13-202ENST00000435327 HDAC4P56524 1084 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 TBX4P57082 545 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 HADHQ16836 314 aaKnown RBP17.31■□□□□ 0.36
CCDC13-202ENST00000435327 ATAT1Q5SQI0 421 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 KLHDC10Q6PID8 442 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 ITFG1Q8TB96 612 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 RNF34Q969K3 372 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 C16orf45Q96MC5 204 aaPredicted RBP17.31■□□□□ 0.36
CCDC13-202ENST00000435327 RIPOR3Q96MK2 946 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 RNF38Q9H0F5 515 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 S1PR5Q9H228 398 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 SLITRK6Q9H5Y7 841 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 TASP1Q9H6P5 420 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 PIGVQ9NUD9 493 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 CALCOCO1Q9P1Z2 691 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 PCSK1NQ9UHG2 260 aa17.31■□□□□ 0.36
CCDC13-202ENST00000435327 NUP210Q8TEM1 1887 aaPredicted RBP17.31■□□□□ 0.36
CCDC13-202ENST00000435327 PRPSAP2O60256 369 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 IGLV3-25P01717 112 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 CKMP06732 381 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 HMBSP08397 361 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 PFKLP17858 780 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 MIPP30301 263 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 PCK1P35558 622 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 MTHFRP42898 656 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 TAS2R40P59535 323 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 TRIP4Q15650 581 aaPredicted RBP17.3■□□□□ 0.36
CCDC13-202ENST00000435327 GET4Q7L5D6 327 aaPredicted RBP17.3■□□□□ 0.36
CCDC13-202ENST00000435327 BNIPLQ7Z465 357 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 NT5DC3Q86UY8 548 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 FAM131BQ86XD5 332 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 ARFGAP1Q8N6T3 406 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 MSLNLQ96KJ4 702 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 SLC22A12Q96S37 553 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 CYP2S1Q96SQ9 504 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 SLC46A2Q9BY10 475 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 WDR6Q9NNW5 1121 aaKnown RBP17.3■□□□□ 0.36
CCDC13-202ENST00000435327 CD207Q9UJ71 328 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 USP18Q9UMW8 372 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 PACSIN2Q9UNF0 486 aaPredicted RBP17.3■□□□□ 0.36
CCDC13-202ENST00000435327 HBS1LQ9Y450 684 aaKnown RBP17.3■□□□□ 0.36
CCDC13-202ENST00000435327 DENND4AQ7Z401 1863 aa17.3■□□□□ 0.36
CCDC13-202ENST00000435327 OLFM2O95897 454 aa17.29■□□□□ 0.36
CCDC13-202ENST00000435327 TCF4P15884 667 aa17.29■□□□□ 0.36
CCDC13-202ENST00000435327 NNTQ13423 1086 aa17.29■□□□□ 0.36
CCDC13-202ENST00000435327 NYAP1Q6ZVC0 841 aa17.29■□□□□ 0.36
CCDC13-202ENST00000435327 UBE2ZQ9H832 354 aaPredicted RBP17.29■□□□□ 0.36
CCDC13-202ENST00000435327 ZWILCHQ9H900 591 aa17.29■□□□□ 0.36
CCDC13-202ENST00000435327 SMPD4Q9NXE4 827 aa17.29■□□□□ 0.36
CCDC13-202ENST00000435327 ZMYM5Q9UJ78 669 aa17.29■□□□□ 0.36
CCDC13-202ENST00000435327 TLR6Q9Y2C9 796 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms