RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 ARHGAP39Q9C0H5 1083 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 ROPN1Q9HAT0 212 aaPredicted RBP16.14■□□□□ 0.17
SCARF1-203ENST00000434376 PCDH18Q9HCL0 1135 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 VTA1Q9NP79 307 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 BATF3Q9NR55 127 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 G3BP2Q9UN86 482 aaKnown RBP16.14■□□□□ 0.17
SCARF1-203ENST00000434376 ATP9BO43861 1147 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 USP17L7P0C7H9 530 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 TPH1P17752 444 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 GCAP28676 217 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 CAV1Q03135 178 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 TRIM32Q13049 653 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 MORF4L2Q15014 288 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 SNX17Q15036 470 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 C9orf57Q5W0N0 161 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 TRABD2AQ86V40 505 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 EXOC8Q8IYI6 725 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 ADGRF2Q8IZF7 708 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 FBXO41Q8TF61 875 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 MOCOSQ96EN8 888 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 RSAD1Q9HA92 442 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 PAPPA2Q9BXP8 1791 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 TCRBV9S1A1TA0A576 114 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 APOC4-APOC2K7ER74 178 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 APOC2P02655 101 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 SCNN1GP51170 649 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 SLC10A2Q12908 348 aaPredicted RBP16.14■□□□□ 0.17
SCARF1-203ENST00000434376 RWDD4Q6NW29 188 aaKnown RBP16.14■□□□□ 0.17
SCARF1-203ENST00000434376 TMEM174Q8WUU8 243 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 KIF13BQ9NQT8 1826 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 ATP8B3O60423 1300 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 LPXNO60711 386 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 ENTPD5O75356 428 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 TAC1P20366 129 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 BGNP21810 368 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 POLE2P56282 527 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 SLC6A3Q01959 620 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 SYDE1Q6ZW31 735 aaPredicted RBP16.13■□□□□ 0.17
SCARF1-203ENST00000434376 PPP1R14CQ8TAE6 165 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 GPR152Q8TDT2 470 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 MYLK2Q9H1R3 596 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 PSME4Q14997 1843 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 CFAP69A5D8W1 941 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 B3GAT3O94766 335 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 EPHB2P29323 1055 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 BNIP1Q12981 228 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 RCN2Q14257 317 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 ECHDC2Q86YB7 292 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 TTC8Q8TAM2 541 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 DTX3LQ8TDB6 740 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 ARMCX1Q9P291 453 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 CPSF2Q9P2I0 782 aaKnown RBP16.13■□□□□ 0.17
SCARF1-203ENST00000434376 PSMC3IPQ9P2W1 217 aaPredicted RBP16.13■□□□□ 0.17
SCARF1-203ENST00000434376 ITGA11Q9UKX5 1188 aa16.13■□□□□ 0.17
SCARF1-203ENST00000434376 NCAM1P13591 858 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 DESP17661 470 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 PHBP35232 272 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 BRCC3P46736 316 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 GEMIN4P57678 1058 aaKnown RBP16.12■□□□□ 0.17
SCARF1-203ENST00000434376 HEATR6Q6AI08 1181 aaKnown RBP16.12■□□□□ 0.17
SCARF1-203ENST00000434376 OSTM1Q86WC4 334 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 GBP7Q8N8V2 638 aaPredicted RBP16.12■□□□□ 0.17
SCARF1-203ENST00000434376 TSC22D3Q99576 134 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 ATXN3LQ9H3M9 355 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 KRT82Q9NSB4 513 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 IPPQ9Y573 584 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 ITGAVP06756 1048 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 OR4Q2P0C623 313 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 TAP1Q03518 808 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 PID1Q7Z2X4 250 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 APBB1IPQ7Z5R6 666 aaPredicted RBP16.12■□□□□ 0.17
SCARF1-203ENST00000434376 LMNTD2Q8IXW0 634 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 CKAP2Q8WWK9 683 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 PTPRN2Q92932 1015 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 SERAC1Q96JX3 654 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 LRRC37BQ96QE4 947 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 RXFP1Q9HBX9 757 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 WDR35Q9P2L0 1181 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 MYBPHLA2RUH7 354 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 IQCA1LA6NCM1 817 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 DARSP14868 501 aaKnown RBP16.12■□□□□ 0.17
SCARF1-203ENST00000434376 ABL2P42684 1182 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 TFDP2Q14188 446 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 LDLRAD1Q5T700 205 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 LCLAT1Q6UWP7 414 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 MAB21L3Q8N8X9 362 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 DNAAF3Q8N9W5 541 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 MCRS1Q96EZ8 462 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 PARK7Q99497 189 aaKnown RBP16.12■□□□□ 0.17
SCARF1-203ENST00000434376 ZFATQ9P243 1243 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 RABGEF1Q9UJ41 708 aa16.12■□□□□ 0.17
SCARF1-203ENST00000434376 DPPA5A6NC42 116 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 ARL4AP40617 200 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 RIPK1Q13546 671 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 OLFML1Q6UWY5 402 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.11■□□□□ 0.17
SCARF1-203ENST00000434376 PQLC3Q8N755 202 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 PGBD4Q96DM1 585 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 RAB3IPQ96QF0 476 aaPredicted RBP16.11■□□□□ 0.17
SCARF1-203ENST00000434376 LHX5Q9H2C1 402 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms