RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 USP29Q9HBJ7 922 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 FAM105AQ9NUU6 356 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 TBK1Q9UHD2 729 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 PADI3Q9ULW8 664 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 SMG5Q9UPR3 1016 aaKnown RBP13.32□□□□□ -0.28
DDX56-204ENST00000431640 POC1B-GALNT4F8VUJ3 575 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 GOLGA8MH3BSY2 632 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 PITPNM1O00562 1244 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 FBXO21O94952 628 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 ZBED1O96006 694 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 VIMP08670 466 aaKnown RBP13.32□□□□□ -0.28
DDX56-204ENST00000431640 NPR3P17342 541 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 CYP2F1P24903 491 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 NOS2P35228 1153 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 CCL23P55773 120 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 YWHAZP63104 245 aaKnown RBP13.32□□□□□ -0.28
DDX56-204ENST00000431640 IFT88Q13099 833 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 DSC3Q14574 896 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 TMED2Q15363 201 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 EFHC2Q5JST6 749 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 FNBP1LQ5T0N5 605 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 NPNTQ6UXI9 565 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 C3orf62Q6ZUJ4 267 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 MRPL10Q7Z7H8 261 aaKnown RBP13.32□□□□□ -0.28
DDX56-204ENST00000431640 TRABD2AQ86V40 505 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 PIGZQ86VD9 579 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 SRRM1Q8IYB3 904 aaKnown RBP13.32□□□□□ -0.28
DDX56-204ENST00000431640 C10orf67Q8IYJ2 551 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 CYP4X1Q8N118 509 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 CKAP2Q8WWK9 683 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 ABHD8Q96I13 439 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 LPIN3Q9BQK8 851 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 KLC2Q9H0B6 622 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 DHX35Q9H5Z1 703 aaKnown RBP13.32□□□□□ -0.28
DDX56-204ENST00000431640 C10orf88Q9H8K7 445 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 GOLGA2P5Q9HBQ8 144 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 LRRC4Q9HBW1 653 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 SSU72Q9NP77 194 aaKnown RBP13.32□□□□□ -0.28
DDX56-204ENST00000431640 RNF19AQ9NV58 838 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 PSMC3IPQ9P2W1 217 aaPredicted RBP13.32□□□□□ -0.28
DDX56-204ENST00000431640 CTNNAL1Q9UBT7 734 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 RABGEF1Q9UJ41 708 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 STAP1Q9ULZ2 295 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 HEY1Q9Y5J3 304 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 FAM47DPA6NHR8 397 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 MEIS3P2A8K0S8 358 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 HACD1B0YJ81 288 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 KCNN4O15554 427 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 PRPF4O43172 522 aaKnown RBP eCLIP13.31□□□□□ -0.28
DDX56-204ENST00000431640 DAB1O75553 588 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 CLTBP09497 229 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 KRT15P19012 456 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 STX2P32856 288 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 ARL4AP40617 200 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 RAB27AP51159 221 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 MRPS5P82675 430 aaKnown RBP13.31□□□□□ -0.28
DDX56-204ENST00000431640 IL9RQ01113 521 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 PPARDQ03181 441 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 KCNJ11Q14654 390 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 FASTKD3Q14CZ7 662 aaKnown RBP13.31□□□□□ -0.28
DDX56-204ENST00000431640 QPCTQ16769 361 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 RAB6CQ53S08 254 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 PPP6R3Q5H9R7 873 aaPredicted RBP13.31□□□□□ -0.28
DDX56-204ENST00000431640 RNF187Q5TA31 235 aaPredicted RBP13.31□□□□□ -0.28
DDX56-204ENST00000431640 ANKRD22Q5VYY1 191 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 TAX1BP1Q86VP1 789 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 OSTM1Q86WC4 334 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 LRRC34Q8IZ02 419 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 FUKQ8N0W3 1084 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 FBXO36Q8NEA4 188 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 SENP8Q96LD8 212 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 MAGEB18Q96M61 343 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 SMC6Q96SB8 1091 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 FERMT1Q9BQL6 677 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 PLCD4Q9BRC7 762 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 MED10Q9BTT4 135 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 RAB6CQ9H0N0 254 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 ACSS3Q9H6R3 686 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 ACTR5Q9H9F9 607 aaPredicted RBP13.31□□□□□ -0.28
DDX56-204ENST00000431640 GPATCH2LQ9NWQ4 482 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 AP4E1Q9UPM8 1137 aa13.31□□□□□ -0.28
DDX56-204ENST00000431640 GCATO75600 419 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 GSTA2P09210 222 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 GCAP28676 217 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 GBP2P32456 591 aaPredicted RBP13.3□□□□□ -0.28
DDX56-204ENST00000431640 MSH2P43246 934 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 MAGEA6P43360 314 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 AIF1P55008 147 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 GPX6P59796 221 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 CA9Q16790 459 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 BBS9Q3SYG4 887 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 HP1BP3Q5SSJ5 553 aaPredicted RBP13.3□□□□□ -0.28
DDX56-204ENST00000431640 WSCD1Q658N2 575 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 ADGRD1Q6QNK2 874 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 RTN4RL1Q86UN2 441 aaPredicted RBP13.3□□□□□ -0.28
DDX56-204ENST00000431640 ANKMY2Q8IV38 441 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 DEFB106AQ8N104 65 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 SIX6OS1Q8N1H7 587 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 ANKRD42Q8N9B4 389 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 GRAMD1AQ96CP6 724 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms