RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 COG7P83436 770 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 TRIP6Q15654 476 aaKnown RBP8.75□□□□□ -1.01
CDH13-203ENST00000431540 UAP1L1Q3KQV9 507 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 FAM26FQ5R3K3 315 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 XP32Q5T750 250 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 EMC10Q5UCC4 262 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 NAIF1Q69YI7 327 aaPredicted RBP8.75□□□□□ -1.01
CDH13-203ENST00000431540 GRAMD4Q6IC98 578 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 PAQR9Q6ZVX9 377 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 DEFB124Q8NES8 71 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 IPO4Q8TEX9 1081 aaKnown RBP8.75□□□□□ -1.01
CDH13-203ENST00000431540 UCMAQ8WVF2 138 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 SCFD1Q8WVM8 642 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 HMGB4Q8WW32 186 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 THAP11Q96EK4 314 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 ZNF396Q96N95 335 aaPredicted RBP8.75□□□□□ -1.01
CDH13-203ENST00000431540 CLIC6Q96NY7 704 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 HNRNPABQ99729 332 aaKnown RBP8.75□□□□□ -1.01
CDH13-203ENST00000431540 IKZF4Q9H2S9 585 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 FBRSQ9HAH7 460 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 CYP3A43Q9HB55 503 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 POLR3BQ9NW08 1133 aaPredicted RBP8.75□□□□□ -1.01
CDH13-203ENST00000431540 DMAC2Q9NW81 257 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 CLIC5Q9NZA1 410 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 CHORDC1Q9UHD1 332 aaPredicted RBP8.75□□□□□ -1.01
CDH13-203ENST00000431540 APOBEC2Q9Y235 224 aaKnown RBP8.75□□□□□ -1.01
CDH13-203ENST00000431540 PCDHB9Q9Y5E1 797 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 ASPMQ8IZT6 3477 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 PTPRJQ12913 1337 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 ZFYVE26Q68DK2 2539 aa8.75□□□□□ -1.01
CDH13-203ENST00000431540 A0A1B0GTW7 788 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 VPS37CA5D8V6 355 aaPredicted RBP8.74□□□□□ -1.01
CDH13-203ENST00000431540 PDXKO00764 312 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 SPTLC2O15270 562 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 GREM1O60565 184 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 TLR5O60602 858 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 PHACTR2O75167 634 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 C4BPAP04003 597 aaKnown RBP8.74□□□□□ -1.01
CDH13-203ENST00000431540 CISD3P0C7P0 127 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 DLATP10515 647 aaKnown RBP8.74□□□□□ -1.01
CDH13-203ENST00000431540 ITPKAP23677 461 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 SLC5A3P53794 718 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 MYL6P60660 151 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 SIM1P81133 766 aaPredicted RBP8.74□□□□□ -1.01
CDH13-203ENST00000431540 ACAP1Q15027 740 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 EIF4HQ15056 248 aaKnown RBP8.74□□□□□ -1.01
CDH13-203ENST00000431540 NFIL3Q16649 462 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 ANO4Q32M45 955 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 C10orf76Q5T2E6 689 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 PROSER1Q86XN7 944 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 TMEM25Q86YD3 366 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 FUKQ8N0W3 1084 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 ARHGAP18Q8N392 663 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 MINDY1Q8N5J2 469 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 RLN3Q8WXF3 142 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 KCNK16Q96T55 309 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 CDC6Q99741 560 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 NUP58Q9BVL2 599 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 ZNF518BQ9C0D4 1074 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 NACA2Q9H009 215 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 WSB2Q9NYS7 404 aaPredicted RBP8.74□□□□□ -1.01
CDH13-203ENST00000431540 USP25Q9UHP3 1055 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 DNMT3LQ9UJW3 386 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 TPX2Q9ULW0 747 aaKnown RBP8.74□□□□□ -1.01
CDH13-203ENST00000431540 INVSQ9Y283 1065 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 ADGRG1Q9Y653 693 aa8.74□□□□□ -1.01
CDH13-203ENST00000431540 TAF4O00268 1085 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 EXOC3O60645 756 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 AP1G2O75843 785 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 DKK1O94907 266 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 CFIP05156 583 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 TYRP14679 529 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 CD6P30203 668 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 DGKGP49619 791 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 ZBTB16Q05516 673 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 INCA1Q0VD86 236 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 SFSWAPQ12872 951 aaKnown RBP8.73□□□□□ -1.01
CDH13-203ENST00000431540 NCOA4Q13772 614 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 STARD3Q14849 445 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 STK38Q15208 465 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 ZACNQ401N2 412 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 SCARA3Q6AZY7 606 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 CCNI2Q6ZMN8 369 aaPredicted RBP8.73□□□□□ -1.01
CDH13-203ENST00000431540 CCDC186Q7Z3E2 898 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 FAM35AQ86V20 835 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 C12orf40Q86WS4 652 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 BBS7Q8IWZ6 715 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 CHPFQ8IZ52 775 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 CPXM2Q8N436 756 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 ZNF557Q8N988 423 aaPredicted RBP8.73□□□□□ -1.01
CDH13-203ENST00000431540 TRIML1Q8N9V2 468 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 RDH13Q8NBN7 331 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 ENGASEQ8NFI3 743 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 SCAMP5Q8TAC9 235 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 ZCCHC14Q8WYQ9 949 aaKnown RBP8.73□□□□□ -1.01
CDH13-203ENST00000431540 CCDC127Q96BQ5 260 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 MRGPRX1Q96LB2 322 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 USP28Q96RU2 1077 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 BBS2Q9BXC9 721 aa8.73□□□□□ -1.01
CDH13-203ENST00000431540 BACH2Q9BYV9 841 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms