RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 LTFP02788 710 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 AMHP03971 560 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 TGM2P21980 687 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 RDXP35241 583 aaKnown RBP17.32■□□□□ 0.36
USHBP1-203ENST00000431146 TSPY1Q01534 308 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 BFSP2Q13515 415 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 MORF4L2Q15014 288 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 HOOK3Q86VS8 718 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 STKLD1Q8NE28 680 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 PRCCQ92733 491 aaPredicted RBP17.32■□□□□ 0.36
USHBP1-203ENST00000431146 CAPS2Q9BXY5 557 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 RNF208Q9H0X6 261 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 PAK6Q9NQU5 681 aaPredicted RBP17.32■□□□□ 0.36
USHBP1-203ENST00000431146 TMEM161AQ9NX61 479 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 PCDHB8Q9UN66 801 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 KCNN4O15554 427 aa17.31■□□□□ 0.36
USHBP1-203ENST00000431146 RBL1P28749 1068 aa17.31■□□□□ 0.36
USHBP1-203ENST00000431146 MAGEA4P43358 317 aa17.31■□□□□ 0.36
USHBP1-203ENST00000431146 BASP1P80723 227 aaKnown RBP17.31■□□□□ 0.36
USHBP1-203ENST00000431146 SLC39A12Q504Y0 691 aa17.31■□□□□ 0.36
USHBP1-203ENST00000431146 PLEKHG4Q58EX7 1191 aa17.31■□□□□ 0.36
USHBP1-203ENST00000431146 AGBL2Q5U5Z8 902 aa17.31■□□□□ 0.36
USHBP1-203ENST00000431146 KDM7AQ6ZMT4 941 aa17.31■□□□□ 0.36
USHBP1-203ENST00000431146 BNIPLQ7Z465 357 aa17.31■□□□□ 0.36
USHBP1-203ENST00000431146 B3GALT6Q96L58 329 aa17.31■□□□□ 0.36
USHBP1-203ENST00000431146 USP29Q9HBJ7 922 aa17.31■□□□□ 0.36
USHBP1-203ENST00000431146 DMAP1Q9NPF5 467 aaPredicted RBP17.31■□□□□ 0.36
USHBP1-203ENST00000431146 ANLNQ9NQW6 1124 aa17.31■□□□□ 0.36
USHBP1-203ENST00000431146 FARP1Q9Y4F1 1045 aaPredicted RBP17.31■□□□□ 0.36
USHBP1-203ENST00000431146 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.31■□□□□ 0.36
USHBP1-203ENST00000431146 CREB3O43889 395 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 TYMPP19971 482 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 CCL23P55773 120 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 CAPN12Q6ZSI9 719 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 ABI1Q8IZP0 508 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 RABEP2Q9H5N1 569 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 PCDHB7Q9Y5E2 793 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 NR2E3Q9Y5X4 410 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 USP3Q9Y6I4 520 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 I6L893 689 aaPredicted RBP17.3■□□□□ 0.36
USHBP1-203ENST00000431146 RASGRF2O14827 1237 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 CAPN15O75808 1086 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 PBX3P40426 434 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 GNGT1P63211 74 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 IFI35P80217 286 aaPredicted RBP17.3■□□□□ 0.36
USHBP1-203ENST00000431146 GUCY1A3Q02108 690 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 NCBP2-AS2Q69YL0 99 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 CEP57Q86XR8 500 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 SPATA2LQ8IUW3 424 aaPredicted RBP17.3■□□□□ 0.36
USHBP1-203ENST00000431146 DDIT4Q9NX09 232 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 SHOC2Q9UQ13 582 aa17.3■□□□□ 0.36
USHBP1-203ENST00000431146 FAM72CH0Y354 149 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 RGS16O15492 202 aaPredicted RBP17.29■□□□□ 0.36
USHBP1-203ENST00000431146 TADA2AO75478 443 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 TMEM63AO94886 807 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 CCL5P13501 91 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 GRIK1P39086 918 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 ARL4AP40617 200 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 SKOR1P84550 965 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 FAM72AQ5TYM5 149 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 FAM72DQ6L9T8 149 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 FAM72BQ86X60 149 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 VSIG1Q86XK7 387 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 PPIL6Q8IXY8 311 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 ZBED8Q8IZ13 594 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 PPP1R12CQ9BZL4 782 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 WDR6Q9NNW5 1121 aaKnown RBP17.29■□□□□ 0.36
USHBP1-203ENST00000431146 ABI2Q9NYB9 513 aaPredicted RBP17.29■□□□□ 0.36
USHBP1-203ENST00000431146 KANSL3Q9P2N6 904 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 CTNNAL1Q9UBT7 734 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 STIP1P31948 543 aaKnown RBP17.29■□□□□ 0.36
USHBP1-203ENST00000431146 PDIA2Q13087 525 aaKnown RBP17.29■□□□□ 0.36
USHBP1-203ENST00000431146 MSS51Q4VC12 460 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 FNBP1LQ5T0N5 605 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 FAXCQ5TGI0 409 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 SDHAF4Q5VUM1 108 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 BSPRYQ5W0U4 402 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 ANKMY2Q8IV38 441 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 CCDC13Q8IYE1 715 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 NAT8LQ8N9F0 302 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 TLCD1Q96CP7 247 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 CASD1Q96PB1 797 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 ARHGEF4Q9NR80 690 aa17.29■□□□□ 0.36
USHBP1-203ENST00000431146 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.29■□□□□ 0.36
USHBP1-203ENST00000431146 PATJQ8NI35 1801 aa17.28■□□□□ 0.36
USHBP1-203ENST00000431146 FOXO6A8MYZ6 492 aa17.28■□□□□ 0.36
USHBP1-203ENST00000431146 NT5C1B-RDH14C9J2C7 533 aa17.28■□□□□ 0.36
USHBP1-203ENST00000431146 SHOX2O60902 331 aaPredicted RBP17.28■□□□□ 0.36
USHBP1-203ENST00000431146 PGFP49763 221 aa17.28■□□□□ 0.36
USHBP1-203ENST00000431146 AUHQ13825 339 aaKnown RBP17.28■□□□□ 0.36
USHBP1-203ENST00000431146 MAPRE1Q15691 268 aaKnown RBP17.28■□□□□ 0.36
USHBP1-203ENST00000431146 CCDC38Q502W7 563 aa17.28■□□□□ 0.36
USHBP1-203ENST00000431146 SCN4BQ8IWT1 228 aa17.28■□□□□ 0.36
USHBP1-203ENST00000431146 RNF139Q8WU17 664 aa17.28■□□□□ 0.36
USHBP1-203ENST00000431146 PGLYRP2Q96PD5 576 aa17.28■□□□□ 0.36
USHBP1-203ENST00000431146 DTLQ9NZJ0 730 aa17.28■□□□□ 0.36
USHBP1-203ENST00000431146 MYO18AQ92614 2054 aaKnown RBP17.28■□□□□ 0.36
USHBP1-203ENST00000431146 MYO16Q9Y6X6 1858 aa17.27■□□□□ 0.36
USHBP1-203ENST00000431146 ARHGEF37A1IGU5 675 aa17.27■□□□□ 0.36
USHBP1-203ENST00000431146 ZNF487B1APH4 448 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms