RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 GUCA1CO95843 209 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 ABCB1P08183 1280 aaPredicted RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 RBP1P09455 135 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 TKTP29401 623 aaKnown RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 RRM2P31350 389 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 CCT3P49368 545 aaKnown RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 ITGA1P56199 1179 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 RAB15P59190 212 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 TUBA4AP68366 448 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 BNC1Q01954 994 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 BFSP2Q13515 415 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 HLFQ16534 295 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 SPDYE7PQ495Y7 208 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 FOXR2Q6PJQ5 311 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 RIPOR1Q6ZS17 1223 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 SYTL1Q8IYJ3 562 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 UBASH3BQ8TF42 649 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 TMEM121Q9BTD3 319 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 NT5C1AQ9BXI3 368 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 ZNF518BQ9C0D4 1074 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 SENP6Q9GZR1 1112 aaPredicted RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 NIF3L1Q9GZT8 377 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 CATSPERBQ9H7T0 1116 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 COPS7BQ9H9Q2 264 aaPredicted RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 RNF146Q9NTX7 359 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 INPP4BO15327 924 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 PRPF4O43172 522 aaKnown RBP eCLIP6.36□□□□□ -1.39
CHD8-202ENST00000430710 PQBP1O60828 265 aaKnown RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 SGPL1O95470 568 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 NPTXRO95502 500 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 FESP07332 822 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 RARBP10826 455 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 NUP62P37198 522 aaPredicted RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 MAGEA10P43363 369 aaPredicted RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 COX10Q12887 443 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 ABRAXAS1Q6UWZ7 409 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 STRA8Q7Z7C7 330 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 ATG16L2Q8NAA4 619 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 RBM46Q8TBY0 533 aaKnown RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 ASIC4Q96FT7 647 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 SLC7A5P2Q9GIP4 190 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 PNPLA3Q9NST1 481 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 SELENONQ9NZV5 590 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 AFF4Q9UHB7 1163 aaKnown RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 PCYOX1Q9UHG3 505 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 SALL3Q9BXA9 1300 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 ANKRD12Q6UB98 2062 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 LSM1O15116 133 aaKnown RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 MAGEB2O15479 319 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 SNAP91O60641 907 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 PGM3O95394 542 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 CCDC166P0CW27 439 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 HSMCR30P0CW71 290 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 RXRGP48443 463 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 CUL2Q13617 745 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 FASTKQ14296 549 aaKnown RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 CYP51A1Q16850 503 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 BROXQ5VW32 411 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 LMBRD2Q68DH5 695 aaPredicted RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 TMEM26Q6ZUK4 368 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 ANKS3Q6ZW76 656 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 CDRT15Q96T59 188 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 HDHD2Q9H0R4 259 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 JPH1Q9HDC5 661 aaPredicted RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 C15orf38-AP3S2A0A0A6YYH1 394 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 H3BNX3 289 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 VWA5AO00534 786 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 ENTPD5O75356 428 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 KRT36O76013 467 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 PGK2P07205 417 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 CYP11B2P19099 503 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 ACAT1P24752 427 aaKnown RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 MRPS22P82650 360 aaKnown RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 GRB10Q13322 594 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 RRP1BQ14684 758 aaKnown RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 ANGPT1Q15389 498 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 GRTP1Q5TC63 336 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 ANGEL2Q5VTE6 544 aaKnown RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 FGD2Q7Z6J4 655 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 ARPINQ7Z6K5 226 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 ZDHHC13Q8IUH4 622 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 ELMOD1Q8N336 334 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 UPF1Q92900 1129 aaKnown RBP eCLIP6.36□□□□□ -1.396e-10■■■■■ 33.3
CHD8-202ENST00000430710 USP13Q92995 863 aaPredicted RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 FOPNLQ96NB1 174 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 PRRG3Q9BZD7 231 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 MTMR4Q9NYA4 1195 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 GMEB1Q9Y692 573 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 SQORQ9Y6N5 450 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 ABHD2P08910 425 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 CCNA2P20248 432 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 RPA3P35244 121 aaPredicted RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 RPL10AP62906 217 aaKnown RBP6.36□□□□□ -1.39
CHD8-202ENST00000430710 RAD51Q06609 339 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 NAB1Q13506 487 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 DGKDQ16760 1214 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 BTBD8Q5XKL5 378 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 SCN4BQ8IWT1 228 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 AMER2Q8N7J2 671 aa6.36□□□□□ -1.39
CHD8-202ENST00000430710 SRPK1Q96SB4 655 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms