RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 TIE1P35590 1138 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 ZNF132P52740 706 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 LAIR1Q6GTX8 287 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 TMEM270Q6UE05 265 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 TMEM92Q6UXU6 159 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 CEP68Q76N32 757 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 MIB1Q86YT6 1006 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 ALLCQ8N6M5 410 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 ANKRD52Q8NB46 1076 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 RBBP8NLQ8NC74 664 aaPredicted RBP17.78■□□□□ 0.44
UBE3D-204ENST00000430071 SHC3Q92529 594 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 PNKPQ96T60 521 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 SPHK2Q9NRA0 654 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 TSPAN16Q9UKR8 245 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 RAB23Q9ULC3 237 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 CNTN6Q9UQ52 1028 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.78■□□□□ 0.44
UBE3D-204ENST00000430071 ADAMTS9Q9P2N4 1935 aa17.77■□□□□ 0.44
UBE3D-204ENST00000430071 AP5Z1O43299 807 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 TULP3O75386 442 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 ADH1CP00326 375 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 HMBSP08397 361 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 PNMA6AP0CW24 399 aaPredicted RBP17.77■□□□□ 0.43
UBE3D-204ENST00000430071 CD19P15391 556 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 TRIM21P19474 475 aaKnown RBP17.77■□□□□ 0.43
UBE3D-204ENST00000430071 PBX1P40424 430 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 KIR2DL1P43626 348 aaPredicted RBP17.77■□□□□ 0.43
UBE3D-204ENST00000430071 GAD2Q05329 585 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 CCDC6Q16204 474 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 ANO4Q32M45 955 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 Q6ZNB5 142 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 TPGS1Q6ZTW0 290 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 IL17RCQ8NAC3 791 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 GAB3Q8WWW8 586 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 BHMTQ93088 406 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 FAM81BQ96LP2 452 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 PCMTD1Q96MG8 357 aaPredicted RBP17.77■□□□□ 0.43
UBE3D-204ENST00000430071 TPSD1Q9BZJ3 242 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 ULBP1Q9BZM6 244 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 XPO4Q9C0E2 1151 aaKnown RBP17.77■□□□□ 0.43
UBE3D-204ENST00000430071 ARHGEF4Q9NR80 690 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 GMEB2Q9UKD1 530 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 USP18Q9UMW8 372 aa17.77■□□□□ 0.43
UBE3D-204ENST00000430071 A0A1W2PQC6 194 aa17.76■□□□□ 0.43
UBE3D-204ENST00000430071 SGK1O00141 431 aa17.76■□□□□ 0.43
UBE3D-204ENST00000430071 AXIN1O15169 862 aa17.76■□□□□ 0.43
UBE3D-204ENST00000430071 RPP40O75818 363 aaKnown RBP17.76■□□□□ 0.43
UBE3D-204ENST00000430071 STC2O76061 302 aa17.76■□□□□ 0.43
UBE3D-204ENST00000430071 KLF8O95600 359 aaPredicted RBP17.76■□□□□ 0.43
UBE3D-204ENST00000430071 KRT5P13647 590 aa17.76■□□□□ 0.43
UBE3D-204ENST00000430071 CNR2P34972 360 aa17.76■□□□□ 0.43
UBE3D-204ENST00000430071 TKTL1P51854 596 aa17.76■□□□□ 0.43
UBE3D-204ENST00000430071 POLR2FP61218 127 aaKnown RBP17.76■□□□□ 0.43
UBE3D-204ENST00000430071 EFEMP1Q12805 493 aa17.76■□□□□ 0.43
UBE3D-204ENST00000430071 RAPGEF1Q13905 1077 aa17.76■□□□□ 0.43
UBE3D-204ENST00000430071 RSPO4Q2I0M5 234 aaPredicted RBP17.76■□□□□ 0.43
UBE3D-204ENST00000430071 PKDCCQ504Y2 493 aa17.76■□□□□ 0.43
UBE3D-204ENST00000430071 SGO2Q562F6 1265 aa17.76■□□□□ 0.43
UBE3D-204ENST00000430071 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.76■□□□□ 0.43
UBE3D-204ENST00000430071 CAMKK1Q8N5S9 505 aa17.76■□□□□ 0.43
UBE3D-204ENST00000430071 TXNDC5Q8NBS9 432 aaKnown RBP17.76■□□□□ 0.43
UBE3D-204ENST00000430071 NEK11Q8NG66 645 aa17.76■□□□□ 0.43
UBE3D-204ENST00000430071 OTUB2Q96DC9 234 aa17.76■□□□□ 0.43
UBE3D-204ENST00000430071 RASAL2Q9UJF2 1139 aa17.76■□□□□ 0.43
UBE3D-204ENST00000430071 DNMT3LQ9UJW3 386 aa17.76■□□□□ 0.43
UBE3D-204ENST00000430071 NCOR2Q9Y618 2525 aa17.76■□□□□ 0.43
UBE3D-204ENST00000430071 A0A0A0MRY4 1105 aa17.75■□□□□ 0.43
UBE3D-204ENST00000430071 O00370 1275 aa17.75■□□□□ 0.43
UBE3D-204ENST00000430071 FOXN3O00409 490 aaPredicted RBP17.75■□□□□ 0.43
UBE3D-204ENST00000430071 PIK3R2O00459 728 aa17.75■□□□□ 0.43
UBE3D-204ENST00000430071 HOXC11O43248 304 aaPredicted RBP17.75■□□□□ 0.43
UBE3D-204ENST00000430071 ADAM23O75077 832 aa17.75■□□□□ 0.43
UBE3D-204ENST00000430071 APODP05090 189 aa17.75■□□□□ 0.43
UBE3D-204ENST00000430071 RETP07949 1114 aa17.75■□□□□ 0.43
UBE3D-204ENST00000430071 BRD2P25440 801 aaKnown RBP17.75■□□□□ 0.43
UBE3D-204ENST00000430071 EIF2DP41214 584 aaKnown RBP17.75■□□□□ 0.43
UBE3D-204ENST00000430071 DRAP1Q14919 205 aaPredicted RBP17.75■□□□□ 0.43
UBE3D-204ENST00000430071 TOGARAM2Q6ZUX3 1019 aa17.75■□□□□ 0.43
UBE3D-204ENST00000430071 EXOC4Q96A65 974 aa17.75■□□□□ 0.43
UBE3D-204ENST00000430071 ERLEC1Q96DZ1 483 aa17.75■□□□□ 0.43
UBE3D-204ENST00000430071 UBXN6Q9BZV1 441 aa17.75■□□□□ 0.43
UBE3D-204ENST00000430071 SMOC1Q9H4F8 434 aa17.75■□□□□ 0.43
UBE3D-204ENST00000430071 ACP6Q9NPH0 428 aa17.75■□□□□ 0.43
UBE3D-204ENST00000430071 NLRC4Q9NPP4 1024 aa17.75■□□□□ 0.43
UBE3D-204ENST00000430071 PLK2Q9NYY3 685 aa17.75■□□□□ 0.43
UBE3D-204ENST00000430071 MMP17Q9ULZ9 603 aa17.75■□□□□ 0.43
UBE3D-204ENST00000430071 NEDD8-MDP1E9PL57 170 aa17.74■□□□□ 0.43
UBE3D-204ENST00000430071 XPO1O14980 1071 aaKnown RBP17.74■□□□□ 0.43
UBE3D-204ENST00000430071 APBB3O95704 486 aa17.74■□□□□ 0.43
UBE3D-204ENST00000430071 PAEPP09466 180 aa17.74■□□□□ 0.43
UBE3D-204ENST00000430071 VDRP11473 427 aa17.74■□□□□ 0.43
UBE3D-204ENST00000430071 PLA2G4AP47712 749 aa17.74■□□□□ 0.43
UBE3D-204ENST00000430071 DGKEP52429 567 aa17.74■□□□□ 0.43
UBE3D-204ENST00000430071 YWHAGP61981 247 aaKnown RBP eCLIP17.74■□□□□ 0.43
UBE3D-204ENST00000430071 PM20D1Q6GTS8 502 aa17.74■□□□□ 0.43
UBE3D-204ENST00000430071 KLHDC10Q6PID8 442 aa17.74■□□□□ 0.43
UBE3D-204ENST00000430071 ZNF276Q8N554 614 aa17.74■□□□□ 0.43
UBE3D-204ENST00000430071 FRMD1Q8N878 549 aa17.74■□□□□ 0.43
UBE3D-204ENST00000430071 ACDQ96AP0 544 aa17.74■□□□□ 0.43
UBE3D-204ENST00000430071 STK33Q9BYT3 514 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms