RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 COL4A3BPQ9Y5P4 624 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 KLF11O14901 512 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZW10O43264 779 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 PRKAB2O43741 272 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 CLPXO76031 633 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 ITIH1P19827 911 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 MAN1A1P33908 653 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 BCAMP50895 628 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 CDKL1Q00532 357 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 PDK1Q15118 436 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 FGD3Q5JSP0 725 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 POTEAQ6S8J7 498 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 KCTD20Q7Z5Y7 419 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 PRPF39Q86UA1 669 aaKnown RBP9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 CARM1Q86X55 608 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 IFNL3Q8IZI9 196 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 C4orf33Q8N1A6 199 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 MAGEB6Q8N7X4 407 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 SIMC1Q8NDZ2 872 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 ACDQ96AP0 544 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 CEP19Q96LK0 163 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZNF512Q96ME7 567 aaPredicted RBP9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 WRNIP1Q96S55 665 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 CLSTN3Q9BQT9 956 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 SERHL2Q9H4I8 314 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 OLAHQ9NV23 265 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 PPARGC1AQ9UBK2 798 aaKnown RBP9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 ARPP21Q9UBL0 812 aaPredicted RBP9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 CDH22Q9UJ99 828 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZHX2Q9Y6X8 837 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 KIF13BQ9NQT8 1826 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 ASTN2O75129 1339 aaPredicted RBP9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 SPATA31A5Q5VU36 1347 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 SPATA31A7Q8IWB4 1347 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 CCDC88AQ3V6T2 1871 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 SCN7AQ01118 1682 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 TEX51A0A1B0GUA7 166 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 OR5K4A6NMS3 321 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 CLDN25C9JDP6 229 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 TRIM77I1YAP6 450 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 TNPO2O14787 897 aaKnown RBP9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 KCNQ2O43526 872 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 TOM1O60784 492 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 SLC5A1P13866 664 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 CD247P20963 164 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 ABCB4P21439 1286 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 ADRA1DP25100 572 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 HADHAP40939 763 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 ECT2LQ008S8 904 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 CDC20Q12834 499 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 NPY5RQ15761 445 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 DUSP7Q16829 419 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 LRIT3Q3SXY7 679 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 AARS2Q5JTZ9 985 aaKnown RBP9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 SEL1L2Q5TEA6 688 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 ADGRA1Q86SQ6 560 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 ALYREFQ86V81 257 aaKnown RBP9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 CLIP4Q8N3C7 705 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 EPS8L1Q8TE68 723 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 NUDT12Q9BQG2 462 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 OSBPL11Q9BXB4 747 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 ARMT1Q9H993 441 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 CPNE5Q9HCH3 593 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 ATP13A2Q9NQ11 1180 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 SCUBE2Q9NQ36 999 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 SNTG2Q9NY99 539 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZSWIM5Q9P217 1185 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 DNMT3BQ9UBC3 853 aaKnown RBP9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 BCAP29Q9UHQ4 241 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 RIMS3Q9UJD0 308 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 HDAC9Q9UKV0 1011 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 PTPN22Q9Y2R2 807 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 PCDHGB3Q9Y5G1 929 aa9.15□□□□□ -0.94
CDC42BPA-206ENST00000429440 A0A1B0GTW7 788 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 OR5K3A6NET4 321 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 DYRK3O43781 588 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 CCNT1O60563 726 aaKnown RBP9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 MYCP01106 439 aaPredicted RBP9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 SERPINA6P08185 405 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 RRM2P31350 389 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 MCM7P33993 719 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 HPCAL1P37235 193 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 NR4A2P43354 598 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 ITGA8P53708 1063 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 FKBP3Q00688 224 aaKnown RBP9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 PTK6Q13882 451 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 SELPLGQ14242 412 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 OTOP3Q7RTS5 596 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 TRIM59Q8IWR1 403 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 LCORLQ8N3X6 602 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 AFAP1L2Q8N4X5 818 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 GRPEL2Q8TAA5 225 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 ZC3H15Q8WU90 426 aaKnown RBP9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 OSGEPQ9NPF4 335 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 TNFRSF10DQ9UBN6 386 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 ANAPC5Q9UJX4 755 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 TMCC3Q9ULS5 477 aa9.14□□□□□ -0.95
CDC42BPA-206ENST00000429440 MAFFQ9ULX9 164 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms