RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 WASHC5Q12768 1159 aa17.63■□□□□ 0.41
SMARCA4-203ENST00000429416 ECM1Q16610 540 aa17.63■□□□□ 0.41
SMARCA4-203ENST00000429416 DENND1BQ6P3S1 775 aa17.63■□□□□ 0.41
SMARCA4-203ENST00000429416 C12orf29Q8N999 325 aa17.63■□□□□ 0.41
SMARCA4-203ENST00000429416 DNAJC19Q96DA6 116 aa17.63■□□□□ 0.41
SMARCA4-203ENST00000429416 SGF29Q96ES7 293 aa17.63■□□□□ 0.41
SMARCA4-203ENST00000429416 TMEM121Q9BTD3 319 aa17.63■□□□□ 0.41
SMARCA4-203ENST00000429416 EIF2AQ9BY44 585 aaKnown RBP17.63■□□□□ 0.41
SMARCA4-203ENST00000429416 TLR5O60602 858 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 CDC25CP30307 473 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 DDX39BQ13838 428 aaKnown RBP17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 IL17AQ16552 155 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 TTC31Q49AM3 519 aaPredicted RBP17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 ZNF557Q8N988 423 aaPredicted RBP17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 GMLQ99445 158 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 CARD9Q9H257 536 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 WWOXQ9NZC7 414 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 GGCXP38435 758 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 FSCBQ5H9T9 825 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 PKN3Q6P5Z2 889 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 DNAJC7Q99615 494 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 TBL1XO60907 577 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 NCKAP1LP55160 1127 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 FUT2Q10981 343 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 C9orf57Q5W0N0 161 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 UGT3A1Q6NUS8 523 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 ZNF513Q8N8E2 541 aaPredicted RBP17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 ACP6Q9NPH0 428 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 ADAM28Q9UKQ2 775 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 MRFAP1Q9Y605 127 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 IGKV6D-41A0A0C4DH26 115 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 CALRP27797 417 aaKnown RBP17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 KYNUQ16719 465 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 MAGEB10Q96LZ2 347 aaPredicted RBP17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 EFHD1Q9BUP0 239 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 CAPN10Q9HC96 672 aa17.62■□□□□ 0.41
SMARCA4-203ENST00000429416 KCNK1O00180 336 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 MAGEA4P43358 317 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 ZNF618Q5T7W0 954 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 KLF6Q99612 283 aaPredicted RBP17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 NCAM2O15394 837 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 LYPLA2O95372 231 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 DDX5P17844 614 aaKnown RBP17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 PAX3P23760 479 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 MROH9Q5TGP6 573 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 WDR59Q6PJI9 974 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 TRMT11Q7Z4G4 463 aaKnown RBP17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 C11orf84Q9BUA3 381 aaPredicted RBP17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 TRABDQ9H4I3 376 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 TRIM33Q9UPN9 1127 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 ASTN1O14525 1302 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 PSEN1P49768 467 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 CNGA2Q16280 664 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 CDKAL1Q5VV42 579 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 HIPK4Q8NE63 616 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 WNT8BQ93098 351 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 SLC10A3P09131 477 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 NOS2P35228 1153 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 SERPINB9P50453 376 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 COL9A3Q14050 684 aaPredicted RBP17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 LONRF1Q17RB8 773 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 FUT10Q6P4F1 479 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 DDX42Q86XP3 938 aaKnown RBP eCLIP17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 VCX3AQ9NNX9 186 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 MAFBQ9Y5Q3 323 aaPredicted RBP17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 O00370 1275 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 IFRD1O00458 451 aaPredicted RBP17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 HIST2H2ACQ16777 129 aaPredicted RBP17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 HIST2H2AA3Q6FI13 130 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 LRRC52Q8N7C0 313 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 ING5Q8WYH8 240 aa17.61■□□□□ 0.41
SMARCA4-203ENST00000429416 FOXP2O15409 715 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 TSPAN1O60635 241 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 CTSEP14091 401 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 ZSCAN26Q16670 478 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 FIGNQ5HY92 759 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 C7orf43Q8WVR3 580 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 AASDHPPTQ9NRN7 309 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 OR12D3Q9UGF7 316 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 CAPN7Q9Y6W3 813 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 RAD51CO43502 376 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 VPS26AO75436 327 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 IL1BP01584 269 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 MSH3P20585 1137 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 CAMK2GQ13555 558 aaPredicted RBP17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 MUM1Q2TAK8 710 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 C4orf33Q8N1A6 199 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 SPPL2BQ8TCT7 592 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 ARHGAP20Q9P2F6 1191 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 ATP8B1O43520 1251 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 LUC7L3O95232 432 aaKnown RBP17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 POU6F1Q14863 301 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 COLGALT1Q8NBJ5 622 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 FLCNQ8NFG4 579 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 RFWD2Q8NHY2 731 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 ACTL9Q8TC94 416 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 TBCBQ99426 244 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 TM6SF2Q9BZW4 377 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 BRD8Q9H0E9 1235 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms