RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 SETD1BQ9UPS6 1966 aaKnown RBP13.14□□□□□ -0.31
LDB3-205ENST00000429277 JCHAINP01591 159 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 ZNF7P17097 686 aaPredicted RBP13.14□□□□□ -0.31
LDB3-205ENST00000429277 YY1P25490 414 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 SEC24CP53992 1094 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 CORO7P57737 925 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 FBXW10Q5XX13 1052 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 ZNF786Q8N393 782 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 KIF2BQ8N4N8 673 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 USP6NLQ92738 828 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 NLNQ9BYT8 704 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 CDC42EP4Q9H3Q1 356 aaKnown RBP13.14□□□□□ -0.31
LDB3-205ENST00000429277 H3BMM5 538 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 XPO1O14980 1071 aaKnown RBP13.14□□□□□ -0.31
LDB3-205ENST00000429277 PAX3P23760 479 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 TRMT5Q32P41 509 aaKnown RBP13.14□□□□□ -0.31
LDB3-205ENST00000429277 DSG4Q86SJ6 1040 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 ACER1Q8TDN7 264 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 FAM120BQ96EK7 910 aaKnown RBP13.14□□□□□ -0.31
LDB3-205ENST00000429277 RAD21L1Q9H4I0 556 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 ACTR8Q9H981 624 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 NOD2Q9HC29 1040 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 STARD7Q9NQZ5 370 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 LZTS1Q9Y250 596 aa13.14□□□□□ -0.31
LDB3-205ENST00000429277 INO80Q9ULG1 1556 aaPredicted RBP13.13□□□□□ -0.31
LDB3-205ENST00000429277 GNG14A0A1W2PPG7 69 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 RAD51BO15315 384 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 GP5P40197 560 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 SKIV2L2P42285 1042 aaKnown RBP13.13□□□□□ -0.31
LDB3-205ENST00000429277 LAMTOR4Q0VGL1 99 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 GALNTL6Q49A17 601 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 SPANXN3Q5MJ09 141 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 CCDC81Q6ZN84 652 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 MTSS1LQ765P7 747 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 DDHD1Q8NEL9 900 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 MYCBPAPQ8TBZ2 947 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 SYTL5Q8TDW5 730 aaPredicted RBP13.13□□□□□ -0.31
LDB3-205ENST00000429277 PNKPQ96T60 521 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 RTFDC1Q9BY42 306 aaPredicted RBP13.13□□□□□ -0.31
LDB3-205ENST00000429277 GBA2Q9HCG7 927 aaPredicted RBP13.13□□□□□ -0.31
LDB3-205ENST00000429277 GPRC5CQ9NQ84 441 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 DNAJC16Q9Y2G8 782 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 MYO3AQ8NEV4 1616 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 C15orf38-AP3S2A0A0A6YYH1 394 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 H3BRB1 525 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 CYP2F1P24903 491 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 RANBP1P43487 201 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 CCNG1P51959 295 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 PTENP60484 403 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 FAM45BPQ6NSW5 357 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 ILDR2Q71H61 639 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 ARPINQ7Z6K5 226 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 SMARCD1Q96GM5 515 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 TUT1Q9H6E5 874 aaKnown RBP13.13□□□□□ -0.31
LDB3-205ENST00000429277 NMRAL1Q9HBL8 299 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 FAM220BPB1ANY3 271 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 UBDO15205 165 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 CYP1A1P04798 512 aaPredicted RBP13.13□□□□□ -0.31
LDB3-205ENST00000429277 TFE3P19532 575 aaPredicted RBP13.13□□□□□ -0.31
LDB3-205ENST00000429277 CSE1LP55060 971 aaKnown RBP13.13□□□□□ -0.31
LDB3-205ENST00000429277 NAA20P61599 178 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 OVOS1Q6IE37 1185 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 COLGALT1Q8NBJ5 622 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 TAS1R2Q8TE23 839 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 ZKSCAN4Q969J2 545 aaPredicted RBP13.13□□□□□ -0.31
LDB3-205ENST00000429277 PRMT6Q96LA8 375 aaPredicted RBP13.13□□□□□ -0.31
LDB3-205ENST00000429277 DCLK3Q9C098 648 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 MIEF1Q9NQG6 463 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 AVENQ9NQS1 362 aaPredicted RBP13.13□□□□□ -0.31
LDB3-205ENST00000429277 MAPRE3Q9UPY8 281 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 RAMP2O60895 175 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 CPA2P48052 419 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 CDK7P50613 346 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 MYL6P60660 151 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 RAB14P61106 215 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 RCN1Q15293 331 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 CDKAL1Q5VV42 579 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 ARHGAP17Q68EM7 881 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 SLC27A1Q6PCB7 646 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 RBM43Q6ZSC3 357 aaKnown RBP13.13□□□□□ -0.31
LDB3-205ENST00000429277 SV2AQ7L0J3 742 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 FAM131BQ86XD5 332 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 FBXL16Q8N461 479 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 ELOVL4Q9GZR5 314 aa13.13□□□□□ -0.31
LDB3-205ENST00000429277 TARSP26639 723 aaKnown RBP13.12□□□□□ -0.31
LDB3-205ENST00000429277 SERPINB5P36952 375 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 ATXN3P54252 364 aaPredicted RBP13.12□□□□□ -0.31
LDB3-205ENST00000429277 AMHR2Q16671 573 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 PRAMEF18Q5VWM3 479 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 EPS8L3Q8TE67 593 aaKnown RBP13.12□□□□□ -0.31
LDB3-205ENST00000429277 SKA1Q96BD8 255 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 PANX3Q96QZ0 392 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 NT5MQ9NPB1 228 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 DIABLOQ9NR28 239 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 RBAK-RBAKDNI3L0D1 243 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 CYP2A6P11509 494 aaPredicted RBP13.12□□□□□ -0.31
LDB3-205ENST00000429277 PGAM1P18669 254 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 MSH3P20585 1137 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 DSG3P32926 999 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 NUP62P37198 522 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms