RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 POLR2DO15514 142 aaKnown RBP19.28■□□□□ 0.68
UPK3BP1-201ENST00000428678 CUTAO60888 179 aa19.28■□□□□ 0.68
UPK3BP1-201ENST00000428678 PPP6R2O75170 966 aa19.28■□□□□ 0.68
UPK3BP1-201ENST00000428678 NCAM1P13591 858 aa19.28■□□□□ 0.68
UPK3BP1-201ENST00000428678 TRIM21P19474 475 aaKnown RBP19.28■□□□□ 0.68
UPK3BP1-201ENST00000428678 PLA2G4AP47712 749 aa19.28■□□□□ 0.68
UPK3BP1-201ENST00000428678 CLDN10P78369 228 aa19.28■□□□□ 0.68
UPK3BP1-201ENST00000428678 SGSM1Q2NKQ1 1148 aa19.28■□□□□ 0.68
UPK3BP1-201ENST00000428678 SHC4Q6S5L8 630 aa19.28■□□□□ 0.68
UPK3BP1-201ENST00000428678 CCNI2Q6ZMN8 369 aaPredicted RBP19.28■□□□□ 0.68
UPK3BP1-201ENST00000428678 Q6ZNB5 142 aa19.28■□□□□ 0.68
UPK3BP1-201ENST00000428678 UNC93AQ86WB7 457 aa19.28■□□□□ 0.68
UPK3BP1-201ENST00000428678 SETD7Q8WTS6 366 aaKnown RBP19.28■□□□□ 0.68
UPK3BP1-201ENST00000428678 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.28■□□□□ 0.68
UPK3BP1-201ENST00000428678 WSB2Q9NYS7 404 aaPredicted RBP19.28■□□□□ 0.68
UPK3BP1-201ENST00000428678 STX6O43752 255 aa19.27■□□□□ 0.68
UPK3BP1-201ENST00000428678 SPOPLQ6IQ16 392 aa19.27■□□□□ 0.68
UPK3BP1-201ENST00000428678 KLHDC10Q6PID8 442 aa19.27■□□□□ 0.68
UPK3BP1-201ENST00000428678 CLEC20AQ6ZU45 233 aa19.27■□□□□ 0.68
UPK3BP1-201ENST00000428678 METTL3Q86U44 580 aaKnown RBP19.27■□□□□ 0.68
UPK3BP1-201ENST00000428678 DNASE2BQ8WZ79 361 aa19.27■□□□□ 0.68
UPK3BP1-201ENST00000428678 ZNF396Q96N95 335 aaPredicted RBP19.27■□□□□ 0.68
UPK3BP1-201ENST00000428678 MKRN2Q9H000 416 aaKnown RBP19.27■□□□□ 0.68
UPK3BP1-201ENST00000428678 USP36Q9P275 1121 aaKnown RBP19.27■□□□□ 0.68
UPK3BP1-201ENST00000428678 NAGPAQ9UK23 515 aa19.27■□□□□ 0.68
UPK3BP1-201ENST00000428678 PCDHA5Q9Y5H7 936 aa19.27■□□□□ 0.68
UPK3BP1-201ENST00000428678 HHLA1C9JL84 531 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 SYNCRIPO60506 623 aaKnown RBP19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 STC2O76061 302 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 RPN1P04843 607 aaKnown RBP19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 IL12RB1P42701 662 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 AFMP43652 599 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 DLG4P78352 724 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 ZACNQ401N2 412 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 TADA2BQ86TJ2 420 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 UCMAQ8WVF2 138 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 TAF4BQ92750 862 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 P2RY11Q96G91 374 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 HNRNPABQ99729 332 aaKnown RBP19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 GAREM1Q9H706 876 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 IL21RQ9HBE5 538 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 ITM2CQ9NQX7 267 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 FBXO10Q9UK96 956 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 PCOLCE2Q9UKZ9 415 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 SLC27A6Q9Y2P4 619 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 NFE2L3Q9Y4A8 694 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 PTPRBP23467 1997 aa19.26■□□□□ 0.67
UPK3BP1-201ENST00000428678 URB1O60287 2271 aaKnown RBP19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 PVALEFA0A1B0GWK0 134 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 KCNJ18B7U540 433 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 CBFA2T3O75081 653 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 KIF20AO95235 890 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 CER1O95813 267 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 ASS1P00966 412 aaKnown RBP19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 PENKP01210 267 aaPredicted RBP19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 PIK3CAP42336 1068 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 ASPAP45381 313 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 TPMTP51580 245 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 MFAP3P55082 362 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 CUL4BQ13620 913 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 GEN1Q17RS7 908 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 COL28A1Q2UY09 1125 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 DCAF12L1Q5VU92 463 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 GLRX5Q86SX6 157 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 SLCO6A1Q86UG4 719 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 PDZD3Q86UT5 571 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 CACUL1Q86Y37 369 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 TMPRSS6Q8IU80 811 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 CADM4Q8NFZ8 388 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 MDM1Q8TC05 714 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 CYFIP2Q96F07 1278 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 SIPA1Q96FS4 1042 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 INTS4Q96HW7 963 aaKnown RBP19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 TWNKQ96RR1 684 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 THAP10Q9P2Z0 257 aaPredicted RBP19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 ZNF510Q9Y2H8 683 aa19.25■□□□□ 0.67
UPK3BP1-201ENST00000428678 NUMA1Q14980 2115 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 NPC1O15118 1278 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 BCAT2O15382 392 aaPredicted RBP19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 CILPO75339 1184 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 YEATS4O95619 227 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 KLKB1P03952 638 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 HMBSP08397 361 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 OXTRP30559 389 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 MATKP42679 507 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 ZNF132P52740 706 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 SV2AQ7L0J3 742 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 SCD5Q86SK9 330 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 GRAMD1CQ8IYS0 662 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 PRCCQ92733 491 aaPredicted RBP19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 PNPLA8Q9NP80 782 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 TM7SF3Q9NS93 570 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 DMAC2Q9NW81 257 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 RASAL2Q9UJF2 1139 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 FNDC3AQ9Y2H6 1198 aaKnown RBP19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 ASXL3Q9C0F0 2248 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 CKAP5Q14008 2032 aa19.24■□□□□ 0.67
UPK3BP1-201ENST00000428678 BPTFQ12830 3046 aa19.23■□□□□ 0.67
UPK3BP1-201ENST00000428678 METTL12A8MUP2 240 aa19.23■□□□□ 0.67
UPK3BP1-201ENST00000428678 HLA-DRAP01903 254 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms