RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ZNF641Q96N77 438 aaPredicted RBP16.6■□□□□ 0.25
C9orf3-206ENST00000428313 MRPL47Q9HD33 250 aaKnown RBP16.6■□□□□ 0.25
C9orf3-206ENST00000428313 XPNPEP1Q9NQW7 623 aa16.6■□□□□ 0.25
C9orf3-206ENST00000428313 BCS1LQ9Y276 419 aa16.6■□□□□ 0.25
C9orf3-206ENST00000428313 ZNF652Q9Y2D9 606 aa16.6■□□□□ 0.25
C9orf3-206ENST00000428313 WTIPA6NIX2 430 aaPredicted RBP16.59■□□□□ 0.25
C9orf3-206ENST00000428313 CYB561D2O14569 222 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 SNAP91O60641 907 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 ATF7P17544 494 aaPredicted RBP16.59■□□□□ 0.25
C9orf3-206ENST00000428313 POLR2EP19388 210 aaKnown RBP16.59■□□□□ 0.25
C9orf3-206ENST00000428313 EIF2AK2P19525 551 aaKnown RBP16.59■□□□□ 0.25
C9orf3-206ENST00000428313 GABRB3P28472 473 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 IDH3AP50213 366 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 EVA1CP58658 441 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 MCCD1P59942 119 aaPredicted RBP16.59■□□□□ 0.25
C9orf3-206ENST00000428313 TRIM16LQ309B1 348 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 MGAT5BQ3V5L5 792 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 LIN9Q5TKA1 542 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 C16orf46Q6P387 395 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 ZNF354CQ86Y25 554 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 PEX5LQ8IYB4 626 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 SDR16C5Q8N3Y7 309 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 TMEM121Q9BTD3 319 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 OSBPL10Q9BXB5 764 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 MRPL46Q9H2W6 279 aaKnown RBP16.59■□□□□ 0.25
C9orf3-206ENST00000428313 GIPC1O14908 333 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 FOXD2O60548 495 aaPredicted RBP16.59■□□□□ 0.25
C9orf3-206ENST00000428313 RFPL1O75677 317 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 GJC1P36383 396 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 CD300CQ08708 224 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 XKR5Q6UX68 686 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 MFSD7Q6UXD7 560 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 SPOCD1Q6ZMY3 1216 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 SETD3Q86TU7 594 aaPredicted RBP16.59■□□□□ 0.25
C9orf3-206ENST00000428313 ZNF677Q86XU0 584 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 ADGRF4Q8IZF3 695 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 UBR7Q8N806 425 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 MINDY2Q8NBR6 621 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 HELQQ8TDG4 1101 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 CRYGNQ8WXF5 182 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 BHMTQ93088 406 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 EIF2AK1Q9BQI3 630 aaKnown RBP16.59■□□□□ 0.25
C9orf3-206ENST00000428313 ANKRD60Q9BZ19 345 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 FRMD8P1Q9BZ68 369 aaPredicted RBP16.59■□□□□ 0.25
C9orf3-206ENST00000428313 SHCBP1LQ9BZQ2 653 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 SEPT3Q9UH03 358 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 SYNPO2Q9UMS6 1093 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 PSME4Q14997 1843 aa16.59■□□□□ 0.25
C9orf3-206ENST00000428313 C7orf72A4D263 438 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 KRT1P04264 644 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 MCF2P10911 925 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 EPHA3P29320 983 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 PPP4CP60510 307 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 CBLBQ13191 982 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 OXA1LQ15070 435 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 STXBP5Q5T5C0 1151 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 TEDDM1Q5T9Z0 273 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 LRRC38Q5VT99 294 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 MON1BQ7L1V2 547 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 GRIN3AQ8TCU5 1115 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 TMEM79Q9BSE2 394 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 MROQ9BYG7 248 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 TMEM9Q9P0T7 183 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 VAV3Q9UKW4 847 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 CDC14AQ9UNH5 594 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 CARD8Q9Y2G2 431 aa16.58■□□□□ 0.25
C9orf3-206ENST00000428313 hCG_1818297A0A087WSY0 165 aa16.58■□□□□ 0.24
C9orf3-206ENST00000428313 ZBTB5O15062 677 aa16.58■□□□□ 0.24
C9orf3-206ENST00000428313 TMEM63AO94886 807 aa16.58■□□□□ 0.24
C9orf3-206ENST00000428313 SCN4AP35499 1836 aa16.58■□□□□ 0.24
C9orf3-206ENST00000428313 ELK3P41970 407 aa16.58■□□□□ 0.24
C9orf3-206ENST00000428313 NSFP46459 744 aaKnown RBP16.58■□□□□ 0.24
C9orf3-206ENST00000428313 TRPC1P48995 793 aa16.58■□□□□ 0.24
C9orf3-206ENST00000428313 KPNA1P52294 538 aaPredicted RBP16.58■□□□□ 0.24
C9orf3-206ENST00000428313 PEX3P56589 373 aa16.58■□□□□ 0.24
C9orf3-206ENST00000428313 GALNT2Q10471 571 aa16.58■□□□□ 0.24
C9orf3-206ENST00000428313 AP3B2Q13367 1082 aa16.58■□□□□ 0.24
C9orf3-206ENST00000428313 PPP2R5DQ14738 602 aa16.58■□□□□ 0.24
C9orf3-206ENST00000428313 PRR16Q569H4 304 aa16.58■□□□□ 0.24
C9orf3-206ENST00000428313 PIGGQ5H8A4 983 aa16.58■□□□□ 0.24
C9orf3-206ENST00000428313 ANKRD26P1Q6NSI1 321 aa16.58■□□□□ 0.24
C9orf3-206ENST00000428313 ATP2A3Q93084 1043 aa16.58■□□□□ 0.24
C9orf3-206ENST00000428313 EHD1Q9H4M9 534 aa16.58■□□□□ 0.24
C9orf3-206ENST00000428313 RIC8BQ9NVN3 520 aa16.58■□□□□ 0.24
C9orf3-206ENST00000428313 KCND2Q9NZV8 630 aa16.58■□□□□ 0.24
C9orf3-206ENST00000428313 XPO7Q9UIA9 1087 aaKnown RBP16.58■□□□□ 0.24
C9orf3-206ENST00000428313 LOC100653049A0A140TA62 436 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 TRIM64A6NGJ6 449 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 KBTBD13C9JR72 458 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 PI4K2BG5E9Z4 385 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 BCAS2O75934 225 aaPredicted RBP16.57■□□□□ 0.24
C9orf3-206ENST00000428313 KRT34O76011 436 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 NTSR2O95665 410 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 P4HBP07237 508 aaKnown RBP16.57■□□□□ 0.24
C9orf3-206ENST00000428313 IKBKEQ14164 716 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 MBLAC2Q68D91 279 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 BNC2Q6ZN30 1099 aaPredicted RBP16.57■□□□□ 0.24
C9orf3-206ENST00000428313 MAVSQ7Z434 540 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 TNIP2Q8NFZ5 429 aa16.57■□□□□ 0.24
C9orf3-206ENST00000428313 PDCD6IPQ8WUM4 868 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms