RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 COMTP21964 271 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 GPC5P78333 572 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 PKN2Q16513 984 aaKnown RBP16.52■□□□□ 0.24
PKP4-205ENST00000426248 BSPRYQ5W0U4 402 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 MFSD5Q6N075 450 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 TTC27Q6P3X3 843 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 C12orf56Q8IXR9 622 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 GIPC3Q8TF64 312 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 SNF8Q96H20 258 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 PRPF18Q99633 342 aaKnown RBP16.52■□□□□ 0.24
PKP4-205ENST00000426248 TSSK1BQ9BXA7 367 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 RNF186Q9NXI6 227 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 DPP3Q9NY33 737 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 TCRBV7S2A1N4TA0A589 114 aa16.52■□□□□ 0.23
PKP4-205ENST00000426248 MEI4A8MW99 385 aa16.52■□□□□ 0.23
PKP4-205ENST00000426248 FKTNO75072 461 aa16.52■□□□□ 0.23
PKP4-205ENST00000426248 CAPN15O75808 1086 aa16.52■□□□□ 0.23
PKP4-205ENST00000426248 KRT4P19013 534 aa16.52■□□□□ 0.23
PKP4-205ENST00000426248 APLP1P51693 650 aa16.52■□□□□ 0.23
PKP4-205ENST00000426248 ATP1A4Q13733 1029 aa16.52■□□□□ 0.23
PKP4-205ENST00000426248 PDK3Q15120 406 aa16.52■□□□□ 0.23
PKP4-205ENST00000426248 SLC45A4Q5BKX6 768 aa16.52■□□□□ 0.23
PKP4-205ENST00000426248 C16orf87Q6PH81 154 aa16.52■□□□□ 0.23
PKP4-205ENST00000426248 OSBPL8Q9BZF1 889 aa16.52■□□□□ 0.23
PKP4-205ENST00000426248 DRC3Q9H069 523 aa16.52■□□□□ 0.23
PKP4-205ENST00000426248 TNFSF13BQ9Y275 285 aa16.52■□□□□ 0.23
PKP4-205ENST00000426248 IGKV6D-21A0A0A0MT36 114 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 SMIM31A0A1B0GVY4 71 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 I3L4J1 428 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 PDLIM1O00151 329 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 SEPT4O43236 478 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 STBD1O95210 358 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 CYP11B1P15538 503 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 GTF2H1P32780 548 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 TAF2Q6P1X5 1199 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 TMEM53Q6P2H8 277 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 TAS1R3Q7RTX0 852 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 WDR49Q8IV35 697 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 TMEM192Q8IY95 271 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 PLEKHO2Q8TD55 490 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 CFAP57Q96MR6 1250 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 TMEM120AQ9BXJ8 343 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 CIDEBQ9UHD4 219 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 PCDHB2Q9Y5E7 798 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 CCDC195A0A1B0GUA6 201 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 A8MXQ7 604 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 MSCO60682 206 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 EDF1O60869 148 aaKnown RBP16.51■□□□□ 0.23
PKP4-205ENST00000426248 CCND3P30281 292 aaPredicted RBP16.51■□□□□ 0.23
PKP4-205ENST00000426248 EIF2B2P49770 351 aaKnown RBP16.51■□□□□ 0.23
PKP4-205ENST00000426248 SCYL2Q6P3W7 929 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 ANKLE1Q8NAG6 615 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 RBM15Q96T37 977 aaKnown RBP eCLIP16.51■□□□□ 0.233e-7■■■■□ 21.1
PKP4-205ENST00000426248 CORO1BQ9BR76 489 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 FAM49BQ9NUQ9 324 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 NINJ2Q9NZG7 142 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 THEGQ9P2T0 379 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 CDY2AQ9Y6F7 541 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 HUS1O60921 280 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 CACNB2Q08289 660 aaPredicted RBP16.51■□□□□ 0.23
PKP4-205ENST00000426248 KRT81Q14533 505 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 CNGA3Q16281 694 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 SLC27A1Q6PCB7 646 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 ZNF410Q86VK4 478 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 ZNF75CPQ92670 426 aaPredicted RBP16.51■□□□□ 0.23
PKP4-205ENST00000426248 MFSD14AQ96MC6 490 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 DCUN1D5Q9BTE7 237 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 CREBZFQ9NS37 354 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 NDUFA13Q9P0J0 144 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 AJAP1Q9UKB5 411 aaPredicted RBP16.51■□□□□ 0.23
PKP4-205ENST00000426248 SYNJ2BP-COX16A0A087WUM0 186 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 KPNA6O60684 536 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 MCF2P10911 925 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 MYL2P10916 166 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 DCAF12L1Q5VU92 463 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 RAPH1Q70E73 1250 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 TTC7BQ86TV6 843 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 TMEM35BQ8NCS4 154 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 FAM149B1Q96BN6 582 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 NUP85Q9BW27 656 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 TAS2R1Q9NYW7 299 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 COX16Q9P0S2 106 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 LRFN2Q9ULH4 789 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 POLIQ9UNA4 740 aa16.51■□□□□ 0.23
PKP4-205ENST00000426248 MYH11P35749 1972 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 ADRA1DP25100 572 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 STAT4Q14765 748 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 ZACNQ401N2 412 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 KAZNQ674X7 775 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 PPP1R2P3Q6NXS1 205 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 DNAJC24Q6P3W2 148 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 GALNT4Q8N4A0 578 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 GDPD5Q8WTR4 605 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 RECQL4O94761 1208 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 CST3P01034 146 aaPredicted RBP16.5■□□□□ 0.23
PKP4-205ENST00000426248 ATXN3P54252 364 aaPredicted RBP16.5■□□□□ 0.23
PKP4-205ENST00000426248 MBTD1Q05BQ5 628 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 CMPK2Q5EBM0 449 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 MORN1Q5T089 497 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 IZUMO3Q5VZ72 239 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms