RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 AMHP03971 560 aa15.79■□□□□ 0.12
ACTB-204ENST00000425660 ZFXP17010 805 aaPredicted RBP15.79■□□□□ 0.12
ACTB-204ENST00000425660 ADRA1BP35368 520 aa15.79■□□□□ 0.12
ACTB-204ENST00000425660 ADCY8P40145 1251 aa15.79■□□□□ 0.12
ACTB-204ENST00000425660 NME3Q13232 169 aa15.79■□□□□ 0.12
ACTB-204ENST00000425660 SLC8B1Q6J4K2 584 aa15.79■□□□□ 0.12
ACTB-204ENST00000425660 TAS1R1Q7RTX1 841 aa15.79■□□□□ 0.12
ACTB-204ENST00000425660 NUP93Q8N1F7 819 aa15.79■□□□□ 0.12
ACTB-204ENST00000425660 GLIS1Q8NBF1 620 aa15.79■□□□□ 0.12
ACTB-204ENST00000425660 ATAD1Q8NBU5 361 aa15.79■□□□□ 0.12
ACTB-204ENST00000425660 TMEM106CQ9BVX2 250 aa15.79■□□□□ 0.12
ACTB-204ENST00000425660 ABCC13Q9NSE7 274 aa15.79■□□□□ 0.12
ACTB-204ENST00000425660 CWC15Q9P013 229 aaKnown RBP15.79■□□□□ 0.12
ACTB-204ENST00000425660 FBXW11Q9UKB1 542 aa15.79■□□□□ 0.12
ACTB-204ENST00000425660 MTMR11A4FU01 709 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 BAIAP3O94812 1187 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 RBP3P10745 1247 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 RAG1P15918 1043 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 STIP1P31948 543 aaKnown RBP15.78■□□□□ 0.12
ACTB-204ENST00000425660 HSD17B3P37058 310 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 CXCR3P49682 368 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 EIF3EP60228 445 aaKnown RBP15.78■□□□□ 0.12
ACTB-204ENST00000425660 WDR5P61964 334 aaKnown RBP15.78■□□□□ 0.12
ACTB-204ENST00000425660 YWHAGP61981 247 aaKnown RBP eCLIP15.78■□□□□ 0.121e-10■□□□□ 9.7
ACTB-204ENST00000425660 DHX9Q08211 1270 aaKnown RBP15.78■□□□□ 0.12
ACTB-204ENST00000425660 MTMR3Q13615 1198 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 TRIP13Q15645 432 aaPredicted RBP15.78■□□□□ 0.12
ACTB-204ENST00000425660 UAP1Q16222 522 aaPredicted RBP15.78■□□□□ 0.12
ACTB-204ENST00000425660 USP41Q3LFD5 358 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 UBE2Q1Q7Z7E8 422 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 SCN4BQ8IWT1 228 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 TMEM199Q8N511 208 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 EDEM1Q92611 657 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 PGLYRP2Q96PD5 576 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 VN1R3Q9BXE9 311 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 MAGEB5Q9BZ81 275 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 FBXO44Q9H4M3 255 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 DDIT4Q9NX09 232 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 PCDH10Q9P2E7 1040 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 SCML2Q9UQR0 700 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 BACE2Q9Y5Z0 518 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 CARNS1A5YM72 827 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 H3BQF6 201 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 I6L893 689 aaPredicted RBP15.78■□□□□ 0.12
ACTB-204ENST00000425660 VNN2O95498 520 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 CPB1P15086 417 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 GGCXP38435 758 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 ARL4AP40617 200 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 NR2C2P49116 596 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 DEFB103AP81534 67 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 SEMA3BQ13214 749 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 EFHC2Q5JST6 749 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 KCNT2Q6UVM3 1135 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 SCD5Q86SK9 330 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 MON1AQ86VX9 555 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 PYROXD2Q8N2H3 581 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 ADAM32Q8TC27 787 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 DQX1Q8TE96 717 aaKnown RBP15.78■□□□□ 0.12
ACTB-204ENST00000425660 SH3GL2Q99962 352 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 TSPYL1Q9H0U9 437 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 ADAM7Q9H2U9 754 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 PRDM5Q9NQX1 630 aaPredicted RBP15.78■□□□□ 0.12
ACTB-204ENST00000425660 TMEM51Q9NW97 253 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 MTRRQ9UBK8 725 aa15.78■□□□□ 0.12
ACTB-204ENST00000425660 SGK1O00141 431 aa15.77■□□□□ 0.11
ACTB-204ENST00000425660 SYF2O95926 243 aaKnown RBP15.77■□□□□ 0.11
ACTB-204ENST00000425660 GOT1P17174 413 aa15.77■□□□□ 0.11
ACTB-204ENST00000425660 EN2P19622 333 aaPredicted RBP15.77■□□□□ 0.11
ACTB-204ENST00000425660 ITGA8P53708 1063 aa15.77■□□□□ 0.11
ACTB-204ENST00000425660 GDF10P55107 478 aa15.77■□□□□ 0.11
ACTB-204ENST00000425660 SLMAPQ14BN4 828 aa15.77■□□□□ 0.11
ACTB-204ENST00000425660 DDR2Q16832 855 aa15.77■□□□□ 0.11
ACTB-204ENST00000425660 CFAP58Q5T655 872 aa15.77■□□□□ 0.11
ACTB-204ENST00000425660 HIBCHQ6NVY1 386 aaPredicted RBP15.77■□□□□ 0.11
ACTB-204ENST00000425660 NPNTQ6UXI9 565 aa15.77■□□□□ 0.11
ACTB-204ENST00000425660 TAC4Q86UU9 113 aa15.77■□□□□ 0.11
ACTB-204ENST00000425660 CMTR2Q8IYT2 770 aaKnown RBP15.77■□□□□ 0.11
ACTB-204ENST00000425660 TTC9BQ8N6N2 239 aa15.77■□□□□ 0.11
ACTB-204ENST00000425660 RNF139Q8WU17 664 aa15.77■□□□□ 0.11
ACTB-204ENST00000425660 RTP4Q96DX8 246 aa15.77■□□□□ 0.11
ACTB-204ENST00000425660 SPATA17Q96L03 361 aa15.77■□□□□ 0.11
ACTB-204ENST00000425660 ZIM3Q96PE6 472 aa15.77■□□□□ 0.11
ACTB-204ENST00000425660 SMOC2Q9H3U7 446 aa15.77■□□□□ 0.11
ACTB-204ENST00000425660 FAM204AQ9H8W3 233 aa15.77■□□□□ 0.11
ACTB-204ENST00000425660 ANLNQ9NQW6 1124 aa15.77■□□□□ 0.11
ACTB-204ENST00000425660 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.77■□□□□ 0.112e-18■□□□□ 10.5
ACTB-204ENST00000425660 SYNJ2BP-COX16A0A087WUM0 186 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 NDC80O14777 642 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 ZSCAN5DPP0CG00 497 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 RARGP13631 454 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 HCAR3P49019 387 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 GPR15P49685 360 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 ZNF135P52742 658 aaPredicted RBP15.76■□□□□ 0.11
ACTB-204ENST00000425660 ROR1Q01973 937 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 XRCC4Q13426 336 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 P3H1Q32P28 736 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 ARL13BQ3SXY8 428 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 NCBP2-AS2Q69YL0 99 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 RNF19BQ6ZMZ0 732 aa15.76■□□□□ 0.11
ACTB-204ENST00000425660 PRUNE1Q86TP1 453 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms