RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 DENND5BQ6ZUT9 1274 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 WDR75Q8IWA0 830 aaKnown RBP7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 SLC26A7Q8TE54 656 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 HPDLQ96IR7 371 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 TRIM4Q9C037 500 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 DHX35Q9H5Z1 703 aaKnown RBP7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 PCDH18Q9HCL0 1135 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 XAB2Q9HCS7 855 aaKnown RBP7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 SIRPGQ9P1W8 387 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 TSPAN16Q9UKR8 245 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 IGKV6D-21A0A0A0MT36 114 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 KIF3CO14782 793 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 NCF2P19878 526 aaPredicted RBP7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 ICAM3P32942 547 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 GMPRP36959 345 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 GBE1Q04446 702 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 BIRC2Q13490 618 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 ACAP1Q15027 740 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 TRMT5Q32P41 509 aaKnown RBP7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 CCDC14Q49A88 953 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 DNAL1Q4LDG9 190 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 BOLA3Q53S33 107 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 RALGPS1Q5JS13 557 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 CFAP157Q5JU67 520 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 NET1Q7Z628 596 aaPredicted RBP7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 ADGRF2Q8IZF7 708 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 PNPLA8Q9NP80 782 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 FAM49BQ9NUQ9 324 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 APOBEC2Q9Y235 224 aaKnown RBP7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 COL4A5P29400 1685 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 WDR27A2RRH5 827 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 HMX2A2RU54 273 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 PDE5AO76074 875 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 VDRP11473 427 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 PRKCHP24723 683 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 SDC4P31431 198 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 ATXN1P54253 815 aaKnown RBP7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 ACTR3P61158 418 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 PDE1BQ01064 536 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 HIC1Q14526 733 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 RBBP5Q15291 538 aaKnown RBP7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 EFCAB12Q6NXP0 572 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 CYP4V2Q6ZWL3 525 aaPredicted RBP7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 C7orf31Q8N865 590 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 GSDMBQ8TAX9 411 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 CPB2Q96IY4 423 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 SIGLEC10Q96LC7 697 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 EBNA1BP2Q99848 306 aaKnown RBP7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 SNRNP25Q9BV90 132 aaKnown RBP7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 B3GNT5Q9BYG0 378 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 BCO2Q9BYV7 579 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 ZCWPW1Q9H0M4 648 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 THAP1Q9NVV9 213 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 IL1RAPL1Q9NZN1 696 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 ZNF180Q9UJW8 692 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 ADAMTS5Q9UNA0 930 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 ASB3Q9Y575 518 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 F8W8V4 182 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 SORBS2O94875 1100 aaKnown RBP7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 ENDOD1O94919 500 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 LYNP07948 512 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 CYP3A5P20815 502 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 ADORA2AP29274 412 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 CRHR1P34998 444 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 GMPSP49915 693 aaPredicted RBP7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 DSG1Q02413 1049 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 TEX44Q53QW1 395 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 N4BP2L1Q5TBK1 243 aaPredicted RBP7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 FOXB2Q5VYV0 432 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 TSHZ1Q6ZSZ6 1077 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 RASSF3Q86WH2 238 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 GATA6Q92908 595 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 CCDC106Q9BWC9 280 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 CEP41Q9BYV8 373 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 C2orf40Q9H1Z8 148 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 PNPOQ9NVS9 261 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 BTBD7Q9P203 1132 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 DOCK5Q9H7D0 1870 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 ZMPSTE24O75844 475 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 SERPINA6P08185 405 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 IQCF3P0C7M6 154 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 P4HA1P13674 534 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 TFE3P19532 575 aaPredicted RBP7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 CYP2F1P24903 491 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 PEX6Q13608 980 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 PDK2Q15119 407 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 GOLGA7BQ2TAP0 167 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 VWA5B1Q5TIE3 1220 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 PMF1Q6P1K2 205 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 KCNT2Q6UVM3 1135 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 CES3Q6UWW8 571 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 DNERQ8NFT8 737 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 CLMNQ96JQ2 1002 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 TUBGCP5Q96RT8 1024 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 ECSITQ9BQ95 431 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 SOX13Q9UN79 622 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 PLA2G4CQ9UP65 541 aa7.78□□□□□ -1.16
SMARCC1-202ENST00000425518 SOWAHBA6NEL2 793 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 C19orf81C9J6K1 198 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms