RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 HNRNPDLO14979 420 aaKnown RBP6.7□□□□□ -1.34
SDCBP-203ENST00000424270 TRAK2O60296 914 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 CACNG3O60359 315 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 TSPAN3O60637 253 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 HIP1RO75146 1068 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 IGLV3-19P01714 112 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 SPATA31C1P0DKV0 1188 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 ALPPL2P10696 532 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 CPA1P15085 419 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 BDNFP23560 247 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 COL8A1P27658 744 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 PCSK1P29120 753 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 CCT6AP40227 531 aaKnown RBP6.7□□□□□ -1.34
SDCBP-203ENST00000424270 USP46P62068 366 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 CYP4F2P78329 520 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 MCL1Q07820 350 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 SFSWAPQ12872 951 aaKnown RBP6.7□□□□□ -1.34
SDCBP-203ENST00000424270 TAF10Q12962 218 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 KCNAB2Q13303 367 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 NECTIN1Q15223 517 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 SHBQ15464 509 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 ZBTB6Q15916 424 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 ISXQ2M1V0 245 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 CFAP221Q4G0U5 840 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 FNDC3BQ53EP0 1204 aaKnown RBP6.7□□□□□ -1.34
SDCBP-203ENST00000424270 HECTD3Q5T447 861 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 HS2ST1Q7LGA3 356 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 C14orf80Q86SX3 495 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 CD302Q8IX05 232 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 SMC5Q8IY18 1101 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 PDCL2Q8N4E4 241 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 OR2T3Q8NH03 318 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 PRR11Q96HE9 360 aaPredicted RBP6.7□□□□□ -1.34
SDCBP-203ENST00000424270 FUBP3Q96I24 572 aaKnown RBP eCLIP6.7□□□□□ -1.34
SDCBP-203ENST00000424270 SERAC1Q96JX3 654 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 AIFM3Q96NN9 605 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 ACBD6Q9BR61 282 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 MSTO1Q9BUK6 570 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 SGK2Q9HBY8 427 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 PCDHB11Q9Y5F2 797 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 CABIN1Q9Y6J0 2220 aa6.7□□□□□ -1.34
SDCBP-203ENST00000424270 A0A1B0GVM2 712 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 A0A1W2PPC4 97 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 LRRC72A6NJI9 287 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 SFI1A8K8P3 1242 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 TLR4O00206 839 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 TRIM38O00635 465 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 ABLIM1O14639 778 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 COCHO43405 550 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 OAS1P00973 400 aaKnown RBP6.69□□□□□ -1.34
SDCBP-203ENST00000424270 KRT19P08727 400 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 PRKCHP24723 683 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 DCTP40126 519 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 PNPLA4P41247 253 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 COPAP53621 1224 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 OXCT1P55809 520 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 PSMC1P62191 440 aaKnown RBP6.69□□□□□ -1.34
SDCBP-203ENST00000424270 RAD51AP2Q09MP3 1159 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 ZNF211Q13398 564 aaPredicted RBP6.69□□□□□ -1.34
SDCBP-203ENST00000424270 ZNF234Q14588 700 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 CLCA4Q14CN2 919 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 TGIF1Q15583 401 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 CCDC142Q17RM4 750 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 PROX2Q3B8N5 592 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 ADCK5Q3MIX3 580 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 CDCP2Q5VXM1 449 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 HAUS3Q68CZ6 603 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 BORAQ6PGQ7 559 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 VSTM1Q6UX27 236 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 ZPBP2Q6X784 338 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 TAS1R3Q7RTX0 852 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 VASH2Q86V25 355 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 ADGRF2Q8IZF7 708 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 PDZD8Q8NEN9 1154 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 WDR36Q8NI36 951 aaKnown RBP6.69□□□□□ -1.34
SDCBP-203ENST00000424270 FBXO32Q969P5 355 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 MYLPFQ96A32 169 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 ARRDC3Q96B67 414 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 SPATA17Q96L03 361 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 SLC4A5Q9BY07 1137 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 ADNPQ9H2P0 1102 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 CYLDQ9NQC7 956 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 ZNF71Q9NQZ8 489 aaPredicted RBP6.69□□□□□ -1.34
SDCBP-203ENST00000424270 ARHGAP28Q9P2N2 729 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 THAP10Q9P2Z0 257 aaPredicted RBP6.69□□□□□ -1.34
SDCBP-203ENST00000424270 ITPR3Q14573 2671 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 CITO14578 2027 aa6.69□□□□□ -1.34
SDCBP-203ENST00000424270 USP9YO00507 2555 aaPredicted RBP6.68□□□□□ -1.34
SDCBP-203ENST00000424270 DENND4CQ5VZ89 1909 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 KNTC1P50748 2209 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 CPED1A4D0V7 1026 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 OGTO15294 1046 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 MTSS1O43312 755 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 MAGEC1O60732 1142 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 OLFM2O95897 454 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 WNT1P04628 370 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 OR52Z1P0C646 297 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 YWHAQP27348 245 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 MAGEA11P43364 429 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 LHX1P48742 406 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms